Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
GDF1P27539 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
GDF1P27539 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
GDF1P27539 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
GDF1P27539 ZNRF2P2-203ENST00000454624 420 ntBASIC23.92■■□□□ 1.42
GDF1P27539 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
GDF1P27539 AC021231.2-201ENST00000594613 730 ntBASIC23.92■■□□□ 1.42
GDF1P27539 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
GDF1P27539 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
GDF1P27539 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
GDF1P27539 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
GDF1P27539 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
GDF1P27539 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.88■■□□□ 1.41
GDF1P27539 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
GDF1P27539 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
GDF1P27539 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
GDF1P27539 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC23.87■■□□□ 1.41
GDF1P27539 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
GDF1P27539 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
GDF1P27539 AC010864.1-201ENST00000609407 1511 ntBASIC23.87■■□□□ 1.41
GDF1P27539 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
GDF1P27539 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
GDF1P27539 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.86■■□□□ 1.41
GDF1P27539 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
GDF1P27539 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
GDF1P27539 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
GDF1P27539 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
GDF1P27539 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.84■■□□□ 1.41
GDF1P27539 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
GDF1P27539 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.84■■□□□ 1.41
GDF1P27539 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC23.84■■□□□ 1.41
GDF1P27539 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
GDF1P27539 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.83■■□□□ 1.41
GDF1P27539 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
GDF1P27539 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
GDF1P27539 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.82■■□□□ 1.4
GDF1P27539 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.81■■□□□ 1.4
GDF1P27539 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
GDF1P27539 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
GDF1P27539 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
GDF1P27539 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.8■■□□□ 1.4
GDF1P27539 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.8■■□□□ 1.4
GDF1P27539 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
GDF1P27539 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.8■■□□□ 1.4
GDF1P27539 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC23.79■■□□□ 1.4
GDF1P27539 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
GDF1P27539 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
GDF1P27539 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
GDF1P27539 AL135925.1-201ENST00000605920 1701 ntBASIC23.76■■□□□ 1.39
GDF1P27539 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GDF1P27539 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
GDF1P27539 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
GDF1P27539 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC23.75■■□□□ 1.39
GDF1P27539 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
GDF1P27539 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
GDF1P27539 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
GDF1P27539 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.74■■□□□ 1.39
GDF1P27539 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
GDF1P27539 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
GDF1P27539 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
GDF1P27539 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.71■■□□□ 1.39
GDF1P27539 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC23.71■■□□□ 1.39
GDF1P27539 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
GDF1P27539 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
GDF1P27539 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
GDF1P27539 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.7■■□□□ 1.38
GDF1P27539 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
GDF1P27539 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
GDF1P27539 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
GDF1P27539 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
GDF1P27539 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
GDF1P27539 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
GDF1P27539 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
GDF1P27539 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.68■■□□□ 1.38
GDF1P27539 LINC01971-201ENST00000617888 1048 ntBASIC23.68■■□□□ 1.38
GDF1P27539 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
GDF1P27539 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
GDF1P27539 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
GDF1P27539 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
GDF1P27539 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
GDF1P27539 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
GDF1P27539 HLA-V-202ENST00000446817 847 ntBASIC23.65■■□□□ 1.38
GDF1P27539 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
GDF1P27539 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
GDF1P27539 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
GDF1P27539 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.64■■□□□ 1.37
GDF1P27539 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
GDF1P27539 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
GDF1P27539 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
GDF1P27539 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.63■■□□□ 1.37
GDF1P27539 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
GDF1P27539 DUX4L11-201ENST00000611504 1267 ntBASIC23.62■■□□□ 1.37
GDF1P27539 DUX4L12-201ENST00000614593 1267 ntBASIC23.62■■□□□ 1.37
GDF1P27539 DUX4L14-201ENST00000621227 1267 ntBASIC23.62■■□□□ 1.37
GDF1P27539 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
GDF1P27539 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.61■■□□□ 1.37
GDF1P27539 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.61■■□□□ 1.37
GDF1P27539 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.61■■□□□ 1.37
GDF1P27539 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.61■■□□□ 1.37
GDF1P27539 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms