Protein–RNA interactions for Protein: P21817

RYR1, Ryanodine receptor 1, humanhuman

Predictions only

Length 5,038 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RYR1P21817 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RYR1P21817 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RYR1P21817 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RYR1P21817 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RYR1P21817 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RYR1P21817 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
RYR1P21817 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.08■□□□□ 0.32
RYR1P21817 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RYR1P21817 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RYR1P21817 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RYR1P21817 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RYR1P21817 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RYR1P21817 AC008813.1-201ENST00000536597 885 ntBASIC17.06■□□□□ 0.32
RYR1P21817 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RYR1P21817 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RYR1P21817 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RYR1P21817 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RYR1P21817 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RYR1P21817 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RYR1P21817 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RYR1P21817 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.03■□□□□ 0.32
RYR1P21817 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC17.03■□□□□ 0.32
RYR1P21817 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RYR1P21817 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RYR1P21817 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RYR1P21817 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RYR1P21817 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RYR1P21817 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.01■□□□□ 0.31
RYR1P21817 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC17■□□□□ 0.31
RYR1P21817 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC17■□□□□ 0.31
RYR1P21817 AL451085.2-201ENST00000605085 799 ntBASIC17■□□□□ 0.31
RYR1P21817 GFER-205ENST00000569451 517 ntTSL 5 BASIC17■□□□□ 0.31
RYR1P21817 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RYR1P21817 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC16.98■□□□□ 0.31
RYR1P21817 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RYR1P21817 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RYR1P21817 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC16.97■□□□□ 0.31
RYR1P21817 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RYR1P21817 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RYR1P21817 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RYR1P21817 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC16.95■□□□□ 0.3
RYR1P21817 CEP120-209ENST00000515110 606 ntTSL 3 BASIC16.95■□□□□ 0.3
RYR1P21817 CHML-204ENST00000638121 920 ntTSL 2 BASIC16.95■□□□□ 0.3
RYR1P21817 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
RYR1P21817 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RYR1P21817 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
RYR1P21817 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.93■□□□□ 0.3
RYR1P21817 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RYR1P21817 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RYR1P21817 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC16.93■□□□□ 0.3
RYR1P21817 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RYR1P21817 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.93■□□□□ 0.3
RYR1P21817 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RYR1P21817 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RYR1P21817 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RYR1P21817 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC16.92■□□□□ 0.3
RYR1P21817 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RYR1P21817 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RYR1P21817 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RYR1P21817 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RYR1P21817 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RYR1P21817 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC16.91■□□□□ 0.3
RYR1P21817 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RYR1P21817 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RYR1P21817 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RYR1P21817 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RYR1P21817 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RYR1P21817 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RYR1P21817 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RYR1P21817 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RYR1P21817 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC16.89■□□□□ 0.29
RYR1P21817 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC16.89■□□□□ 0.29
RYR1P21817 TPT1-202ENST00000379055 948 ntTSL 2 BASIC16.88■□□□□ 0.29
RYR1P21817 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RYR1P21817 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC16.87■□□□□ 0.29
RYR1P21817 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RYR1P21817 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RYR1P21817 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RYR1P21817 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RYR1P21817 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RYR1P21817 AC004987.1-201ENST00000428627 508 ntBASIC16.85■□□□□ 0.29
RYR1P21817 TSPY13P-201ENST00000338964 914 ntBASIC16.84■□□□□ 0.29
RYR1P21817 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RYR1P21817 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RYR1P21817 U85056.1-201ENST00000616429 682 ntBASIC16.83■□□□□ 0.28
RYR1P21817 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC16.83■□□□□ 0.28
RYR1P21817 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
RYR1P21817 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.82■□□□□ 0.28
RYR1P21817 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
RYR1P21817 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC16.82■□□□□ 0.28
RYR1P21817 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RYR1P21817 AC025884.2-201ENST00000553429 711 ntBASIC16.81■□□□□ 0.28
RYR1P21817 AC131212.1-201ENST00000613771 668 ntBASIC16.81■□□□□ 0.28
RYR1P21817 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RYR1P21817 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RYR1P21817 CHST11-202ENST00000546689 756 ntTSL 2 BASIC16.8■□□□□ 0.28
RYR1P21817 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RYR1P21817 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RYR1P21817 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.8■□□□□ 0.28
RYR1P21817 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms