Protein–RNA interactions for Protein: P17029

ZKSCAN1, Zinc finger protein with KRAB and SCAN domains 1, humanhuman

Predicted RBP Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1P17029 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
ZKSCAN1P17029 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
ZKSCAN1P17029 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
ZKSCAN1P17029 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
ZKSCAN1P17029 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
ZKSCAN1P17029 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
ZKSCAN1P17029 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
ZKSCAN1P17029 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC31.63■■■□□ 2.65
ZKSCAN1P17029 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
ZKSCAN1P17029 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
ZKSCAN1P17029 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
ZKSCAN1P17029 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
ZKSCAN1P17029 ABCB10P3-201ENST00000561950 2166 ntBASIC31.61■■■□□ 2.65
ZKSCAN1P17029 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
ZKSCAN1P17029 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
ZKSCAN1P17029 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
ZKSCAN1P17029 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
ZKSCAN1P17029 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.59■■■□□ 2.65
ZKSCAN1P17029 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.58■■■□□ 2.65
ZKSCAN1P17029 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
ZKSCAN1P17029 HLA-V-202ENST00000446817 847 ntBASIC31.58■■■□□ 2.65
ZKSCAN1P17029 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.58■■■□□ 2.65
ZKSCAN1P17029 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
ZKSCAN1P17029 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
ZKSCAN1P17029 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.56■■■□□ 2.64
ZKSCAN1P17029 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.56■■■□□ 2.64
ZKSCAN1P17029 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.56■■■□□ 2.64
ZKSCAN1P17029 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.56■■■□□ 2.64
ZKSCAN1P17029 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
ZKSCAN1P17029 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC31.55■■■□□ 2.64
ZKSCAN1P17029 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
ZKSCAN1P17029 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
ZKSCAN1P17029 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.55■■■□□ 2.64
ZKSCAN1P17029 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.55■■■□□ 2.64
ZKSCAN1P17029 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.54■■■□□ 2.64
ZKSCAN1P17029 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
ZKSCAN1P17029 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
ZKSCAN1P17029 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.53■■■□□ 2.64
ZKSCAN1P17029 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
ZKSCAN1P17029 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ZKSCAN1P17029 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ZKSCAN1P17029 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.52■■■□□ 2.64
ZKSCAN1P17029 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
ZKSCAN1P17029 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
ZKSCAN1P17029 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
ZKSCAN1P17029 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.5■■■□□ 2.63
ZKSCAN1P17029 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
ZKSCAN1P17029 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
ZKSCAN1P17029 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.48■■■□□ 2.63
ZKSCAN1P17029 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
ZKSCAN1P17029 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
ZKSCAN1P17029 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
ZKSCAN1P17029 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.47■■■□□ 2.63
ZKSCAN1P17029 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
ZKSCAN1P17029 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
ZKSCAN1P17029 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
ZKSCAN1P17029 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.45■■■□□ 2.63
ZKSCAN1P17029 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.45■■■□□ 2.63
ZKSCAN1P17029 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC31.45■■■□□ 2.62
ZKSCAN1P17029 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.44■■■□□ 2.62
ZKSCAN1P17029 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.44■■■□□ 2.62
ZKSCAN1P17029 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
ZKSCAN1P17029 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.43■■■□□ 2.62
ZKSCAN1P17029 AC139426.1-201ENST00000568218 2529 ntBASIC31.43■■■□□ 2.62
ZKSCAN1P17029 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.43■■■□□ 2.62
ZKSCAN1P17029 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
ZKSCAN1P17029 AC010864.1-201ENST00000609407 1511 ntBASIC31.42■■■□□ 2.62
ZKSCAN1P17029 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
ZKSCAN1P17029 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
ZKSCAN1P17029 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
ZKSCAN1P17029 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.4■■■□□ 2.62
ZKSCAN1P17029 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
ZKSCAN1P17029 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
ZKSCAN1P17029 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC31.39■■■□□ 2.62
ZKSCAN1P17029 ZNRF2P2-203ENST00000454624 420 ntBASIC31.39■■■□□ 2.62
ZKSCAN1P17029 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
ZKSCAN1P17029 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
ZKSCAN1P17029 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
ZKSCAN1P17029 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
ZKSCAN1P17029 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
ZKSCAN1P17029 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
ZKSCAN1P17029 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
ZKSCAN1P17029 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
ZKSCAN1P17029 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
ZKSCAN1P17029 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
ZKSCAN1P17029 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.34■■■□□ 2.61
ZKSCAN1P17029 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.61
ZKSCAN1P17029 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
ZKSCAN1P17029 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
ZKSCAN1P17029 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
ZKSCAN1P17029 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
ZKSCAN1P17029 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.31■■■□□ 2.6
ZKSCAN1P17029 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
ZKSCAN1P17029 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
ZKSCAN1P17029 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
ZKSCAN1P17029 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
ZKSCAN1P17029 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.3■■■□□ 2.6
ZKSCAN1P17029 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
ZKSCAN1P17029 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ZKSCAN1P17029 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms