Protein–RNA interactions for Protein: P0C7I0

USP17L8, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 8, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L8P0C7I0 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC32.16■■■□□ 2.74
USP17L8P0C7I0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC32.16■■■□□ 2.74
USP17L8P0C7I0 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
USP17L8P0C7I0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC32.16■■■□□ 2.74
USP17L8P0C7I0 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
USP17L8P0C7I0 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC32.15■■■□□ 2.74
USP17L8P0C7I0 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC32.14■■■□□ 2.74
USP17L8P0C7I0 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC32.14■■■□□ 2.74
USP17L8P0C7I0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
USP17L8P0C7I0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC32.14■■■□□ 2.74
USP17L8P0C7I0 ABHD17AP3-201ENST00000503096 1137 ntBASIC32.14■■■□□ 2.74
USP17L8P0C7I0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC32.14■■■□□ 2.74
USP17L8P0C7I0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC32.14■■■□□ 2.74
USP17L8P0C7I0 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC32.14■■■□□ 2.74
USP17L8P0C7I0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
USP17L8P0C7I0 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
USP17L8P0C7I0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC32.11■■■□□ 2.73
USP17L8P0C7I0 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC32.11■■■□□ 2.73
USP17L8P0C7I0 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
USP17L8P0C7I0 DUX4L13-201ENST00000554103 1267 ntBASIC32.09■■■□□ 2.73
USP17L8P0C7I0 DUX4L15-201ENST00000611059 1267 ntBASIC32.09■■■□□ 2.73
USP17L8P0C7I0 DUX4L23-201ENST00000615195 1269 ntBASIC32.09■■■□□ 2.73
USP17L8P0C7I0 DUX4L24-201ENST00000617576 1269 ntBASIC32.09■■■□□ 2.73
USP17L8P0C7I0 DUX4L22-201ENST00000618238 1269 ntBASIC32.09■■■□□ 2.73
USP17L8P0C7I0 DUX4L20-201ENST00000619712 1269 ntBASIC32.09■■■□□ 2.73
USP17L8P0C7I0 DUX4L21-201ENST00000622058 1269 ntBASIC32.09■■■□□ 2.73
USP17L8P0C7I0 DUX4L10-201ENST00000622460 1267 ntBASIC32.09■■■□□ 2.73
USP17L8P0C7I0 DUX4L25-201ENST00000624915 1269 ntBASIC32.09■■■□□ 2.73
USP17L8P0C7I0 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
USP17L8P0C7I0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC32.08■■■□□ 2.73
USP17L8P0C7I0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC32.08■■■□□ 2.73
USP17L8P0C7I0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
USP17L8P0C7I0 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
USP17L8P0C7I0 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
USP17L8P0C7I0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC32.06■■■□□ 2.72
USP17L8P0C7I0 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
USP17L8P0C7I0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
USP17L8P0C7I0 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
USP17L8P0C7I0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC32.05■■■□□ 2.72
USP17L8P0C7I0 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC32.05■■■□□ 2.72
USP17L8P0C7I0 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
USP17L8P0C7I0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC32.04■■■□□ 2.72
USP17L8P0C7I0 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC32.04■■■□□ 2.72
USP17L8P0C7I0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
USP17L8P0C7I0 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC32.03■■■□□ 2.72
USP17L8P0C7I0 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
USP17L8P0C7I0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
USP17L8P0C7I0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC32.01■■■□□ 2.71
USP17L8P0C7I0 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC32.01■■■□□ 2.71
USP17L8P0C7I0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC32■■■□□ 2.71
USP17L8P0C7I0 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC32■■■□□ 2.71
USP17L8P0C7I0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC32■■■□□ 2.71
USP17L8P0C7I0 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
USP17L8P0C7I0 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.99■■■□□ 2.71
USP17L8P0C7I0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.99■■■□□ 2.71
USP17L8P0C7I0 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC31.98■■■□□ 2.71
USP17L8P0C7I0 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
USP17L8P0C7I0 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
USP17L8P0C7I0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
USP17L8P0C7I0 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.94■■■□□ 2.7
USP17L8P0C7I0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
USP17L8P0C7I0 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
USP17L8P0C7I0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
USP17L8P0C7I0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
USP17L8P0C7I0 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
USP17L8P0C7I0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC31.89■■■□□ 2.7
USP17L8P0C7I0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.89■■■□□ 2.69
USP17L8P0C7I0 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC31.89■■■□□ 2.69
USP17L8P0C7I0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.87■■■□□ 2.69
USP17L8P0C7I0 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
USP17L8P0C7I0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
USP17L8P0C7I0 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
USP17L8P0C7I0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC31.84■■■□□ 2.69
USP17L8P0C7I0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC31.84■■■□□ 2.69
USP17L8P0C7I0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC31.84■■■□□ 2.69
USP17L8P0C7I0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.83■■■□□ 2.69
USP17L8P0C7I0 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.81■■■□□ 2.68
USP17L8P0C7I0 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC31.81■■■□□ 2.68
USP17L8P0C7I0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC31.81■■■□□ 2.68
USP17L8P0C7I0 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
USP17L8P0C7I0 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
USP17L8P0C7I0 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
USP17L8P0C7I0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
USP17L8P0C7I0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
USP17L8P0C7I0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
USP17L8P0C7I0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
USP17L8P0C7I0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
USP17L8P0C7I0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
USP17L8P0C7I0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
USP17L8P0C7I0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
USP17L8P0C7I0 AL161658.1-201ENST00000623641 1967 ntBASIC31.79■■■□□ 2.68
USP17L8P0C7I0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.78■■■□□ 2.68
USP17L8P0C7I0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC31.76■■■□□ 2.67
USP17L8P0C7I0 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
USP17L8P0C7I0 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.75■■■□□ 2.67
USP17L8P0C7I0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.75■■■□□ 2.67
USP17L8P0C7I0 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
USP17L8P0C7I0 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
USP17L8P0C7I0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
USP17L8P0C7I0 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms