Protein–RNA interactions for Protein: P09871

C1S, Complement C1s subcomponent, humanhuman

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1SP09871 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
C1SP09871 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.48■■□□□ 1.83
C1SP09871 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
C1SP09871 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
C1SP09871 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.46■■□□□ 1.83
C1SP09871 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.46■■□□□ 1.83
C1SP09871 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
C1SP09871 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.46■■□□□ 1.83
C1SP09871 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
C1SP09871 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.45■■□□□ 1.82
C1SP09871 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
C1SP09871 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
C1SP09871 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.44■■□□□ 1.82
C1SP09871 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.44■■□□□ 1.82
C1SP09871 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
C1SP09871 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.44■■□□□ 1.82
C1SP09871 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.43■■□□□ 1.82
C1SP09871 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.43■■□□□ 1.82
C1SP09871 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
C1SP09871 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
C1SP09871 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
C1SP09871 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
C1SP09871 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
C1SP09871 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
C1SP09871 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.41■■□□□ 1.82
C1SP09871 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
C1SP09871 DUX4L29-201ENST00000425409 679 ntBASIC26.41■■□□□ 1.82
C1SP09871 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
C1SP09871 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
C1SP09871 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.4■■□□□ 1.82
C1SP09871 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
C1SP09871 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
C1SP09871 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
C1SP09871 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.81
C1SP09871 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
C1SP09871 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
C1SP09871 AL135925.1-201ENST00000605920 1701 ntBASIC26.38■■□□□ 1.81
C1SP09871 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
C1SP09871 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
C1SP09871 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
C1SP09871 AC010864.1-201ENST00000609407 1511 ntBASIC26.35■■□□□ 1.81
C1SP09871 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
C1SP09871 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
C1SP09871 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.34■■□□□ 1.81
C1SP09871 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
C1SP09871 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
C1SP09871 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
C1SP09871 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.32■■□□□ 1.8
C1SP09871 MIR6090-201ENST00000622481 60 ntBASIC26.32■■□□□ 1.8
C1SP09871 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
C1SP09871 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
C1SP09871 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
C1SP09871 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.29■■□□□ 1.8
C1SP09871 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
C1SP09871 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.29■■□□□ 1.8
C1SP09871 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
C1SP09871 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
C1SP09871 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
C1SP09871 AC108673.1-201ENST00000510422 1159 ntBASIC26.28■■□□□ 1.8
C1SP09871 MIR4449-201ENST00000578365 66 ntBASIC26.28■■□□□ 1.8
C1SP09871 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.28■■□□□ 1.8
C1SP09871 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
C1SP09871 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
C1SP09871 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
C1SP09871 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
C1SP09871 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
C1SP09871 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.26■■□□□ 1.79
C1SP09871 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
C1SP09871 MIR639-201ENST00000384974 98 ntBASIC26.24■■□□□ 1.79
C1SP09871 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
C1SP09871 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.23■■□□□ 1.79
C1SP09871 ST7-AS1-201ENST00000456775 1889 ntBASIC26.23■■□□□ 1.79
C1SP09871 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
C1SP09871 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.22■■□□□ 1.79
C1SP09871 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
C1SP09871 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.21■■□□□ 1.79
C1SP09871 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.21■■□□□ 1.79
C1SP09871 AC021231.2-201ENST00000594613 730 ntBASIC26.21■■□□□ 1.79
C1SP09871 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
C1SP09871 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
C1SP09871 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
C1SP09871 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
C1SP09871 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.19■■□□□ 1.78
C1SP09871 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.19■■□□□ 1.78
C1SP09871 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
C1SP09871 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
C1SP09871 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.17■■□□□ 1.78
C1SP09871 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.17■■□□□ 1.78
C1SP09871 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
C1SP09871 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
C1SP09871 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
C1SP09871 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
C1SP09871 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
C1SP09871 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.14■■□□□ 1.78
C1SP09871 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.13■■□□□ 1.77
C1SP09871 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
C1SP09871 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
C1SP09871 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
C1SP09871 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
C1SP09871 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 185.5 ms