Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
SNRPA1P09661 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC34.09■■■■□ 3.05
SNRPA1P09661 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC34.09■■■■□ 3.05
SNRPA1P09661 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
SNRPA1P09661 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC34.07■■■■□ 3.04
SNRPA1P09661 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
SNRPA1P09661 MIR3648-2-201ENST00000581792 180 ntBASIC34.06■■■■□ 3.04
SNRPA1P09661 DUX4L11-201ENST00000611504 1267 ntBASIC34.06■■■■□ 3.04
SNRPA1P09661 DUX4L12-201ENST00000614593 1267 ntBASIC34.06■■■■□ 3.04
SNRPA1P09661 MIR3648-1-201ENST00000615959 180 ntBASIC34.06■■■■□ 3.04
SNRPA1P09661 DUX4L14-201ENST00000621227 1267 ntBASIC34.06■■■■□ 3.04
SNRPA1P09661 MIR639-201ENST00000384974 98 ntBASIC34.04■■■■□ 3.04
SNRPA1P09661 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
SNRPA1P09661 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC34.03■■■■□ 3.04
SNRPA1P09661 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC34.02■■■■□ 3.04
SNRPA1P09661 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC34.02■■■■□ 3.04
SNRPA1P09661 GDI1-215ENST00000630693 786 ntTSL 4 BASIC34.02■■■■□ 3.04
SNRPA1P09661 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.03
SNRPA1P09661 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC34.01■■■■□ 3.03
SNRPA1P09661 AC016575.1-201ENST00000607026 382 ntBASIC34■■■■□ 3.03
SNRPA1P09661 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC34■■■■□ 3.03
SNRPA1P09661 MIR4449-201ENST00000578365 66 ntBASIC33.99■■■■□ 3.03
SNRPA1P09661 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC33.97■■■■□ 3.03
SNRPA1P09661 EI24-212ENST00000615917 1407 ntTSL 2 BASIC33.97■■■■□ 3.03
SNRPA1P09661 AGPS-202ENST00000409888 815 ntTSL 4 BASIC33.97■■■■□ 3.03
SNRPA1P09661 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
SNRPA1P09661 CR559946.2-201ENST00000623684 991 ntBASIC33.96■■■■□ 3.03
SNRPA1P09661 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC33.95■■■■□ 3.03
SNRPA1P09661 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
SNRPA1P09661 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC33.94■■■■□ 3.02
SNRPA1P09661 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC33.94■■■■□ 3.02
SNRPA1P09661 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC33.93■■■■□ 3.02
SNRPA1P09661 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC33.93■■■■□ 3.02
SNRPA1P09661 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC33.92■■■■□ 3.02
SNRPA1P09661 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
SNRPA1P09661 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC33.91■■■■□ 3.02
SNRPA1P09661 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC33.91■■■■□ 3.02
SNRPA1P09661 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
SNRPA1P09661 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC33.89■■■■□ 3.02
SNRPA1P09661 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC33.89■■■■□ 3.02
SNRPA1P09661 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC33.89■■■■□ 3.02
SNRPA1P09661 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC33.89■■■■□ 3.02
SNRPA1P09661 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC33.87■■■■□ 3.01
SNRPA1P09661 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC33.86■■■■□ 3.01
SNRPA1P09661 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
SNRPA1P09661 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC33.85■■■■□ 3.01
SNRPA1P09661 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
SNRPA1P09661 CALM3-209ENST00000597743 577 ntTSL 4 BASIC33.84■■■■□ 3.01
SNRPA1P09661 AC010864.1-201ENST00000609407 1511 ntBASIC33.84■■■■□ 3.01
SNRPA1P09661 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC33.83■■■■□ 3.01
SNRPA1P09661 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC33.83■■■■□ 3.01
SNRPA1P09661 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
SNRPA1P09661 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
SNRPA1P09661 DUX4L13-201ENST00000554103 1267 ntBASIC33.81■■■■□ 3
SNRPA1P09661 DUX4L15-201ENST00000611059 1267 ntBASIC33.81■■■■□ 3
SNRPA1P09661 DUX4L23-201ENST00000615195 1269 ntBASIC33.81■■■■□ 3
SNRPA1P09661 DUX4L24-201ENST00000617576 1269 ntBASIC33.81■■■■□ 3
SNRPA1P09661 DUX4L22-201ENST00000618238 1269 ntBASIC33.81■■■■□ 3
SNRPA1P09661 DUX4L20-201ENST00000619712 1269 ntBASIC33.81■■■■□ 3
SNRPA1P09661 DUX4L21-201ENST00000622058 1269 ntBASIC33.81■■■■□ 3
SNRPA1P09661 DUX4L10-201ENST00000622460 1267 ntBASIC33.81■■■■□ 3
SNRPA1P09661 DUX4L25-201ENST00000624915 1269 ntBASIC33.81■■■■□ 3
SNRPA1P09661 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
SNRPA1P09661 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC33.8■■■■□ 3
SNRPA1P09661 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
SNRPA1P09661 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC33.79■■■■□ 3
SNRPA1P09661 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC33.79■■■■□ 3
SNRPA1P09661 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC33.78■■■■□ 3
SNRPA1P09661 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC33.78■■■■□ 3
SNRPA1P09661 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC33.78■■■■□ 3
SNRPA1P09661 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
SNRPA1P09661 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC33.77■■■■□ 3
SNRPA1P09661 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
SNRPA1P09661 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC33.77■■■■□ 3
SNRPA1P09661 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC33.76■■■□□ 2.99
SNRPA1P09661 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC33.76■■■□□ 2.99
SNRPA1P09661 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
SNRPA1P09661 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
SNRPA1P09661 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
SNRPA1P09661 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC33.73■■■□□ 2.99
SNRPA1P09661 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC33.73■■■□□ 2.99
SNRPA1P09661 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC33.73■■■□□ 2.99
SNRPA1P09661 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
SNRPA1P09661 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
SNRPA1P09661 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC33.72■■■□□ 2.99
SNRPA1P09661 CHML-204ENST00000638121 920 ntTSL 2 BASIC33.72■■■□□ 2.99
SNRPA1P09661 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
SNRPA1P09661 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC33.7■■■□□ 2.99
SNRPA1P09661 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC33.69■■■□□ 2.98
SNRPA1P09661 LINC00273-201ENST00000539813 1452 ntBASIC33.69■■■□□ 2.98
SNRPA1P09661 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
SNRPA1P09661 HES6-205ENST00000409356 528 ntTSL 2 BASIC33.68■■■□□ 2.98
SNRPA1P09661 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC33.68■■■□□ 2.98
SNRPA1P09661 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
SNRPA1P09661 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC33.68■■■□□ 2.98
SNRPA1P09661 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC33.67■■■□□ 2.98
SNRPA1P09661 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC33.67■■■□□ 2.98
SNRPA1P09661 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC33.66■■■□□ 2.98
SNRPA1P09661 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC33.64■■■□□ 2.98
SNRPA1P09661 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms