Protein–RNA interactions for Protein: P09234

SNRPC, U1 small nuclear ribonucleoprotein C, humanhuman

Known RBP Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP09234 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
SNRPCP09234 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SNRPCP09234 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRPCP09234 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNRPCP09234 AP002365.1-201ENST00000603448 772 ntBASIC20.42■□□□□ 0.86
SNRPCP09234 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SNRPCP09234 AL135925.1-201ENST00000605920 1701 ntBASIC20.41■□□□□ 0.86
SNRPCP09234 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNRPCP09234 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SNRPCP09234 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNRPCP09234 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNRPCP09234 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.4■□□□□ 0.86
SNRPCP09234 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SNRPCP09234 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SNRPCP09234 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNRPCP09234 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNRPCP09234 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNRPCP09234 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.37■□□□□ 0.85
SNRPCP09234 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SNRPCP09234 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SNRPCP09234 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNRPCP09234 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNRPCP09234 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNRPCP09234 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNRPCP09234 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNRPCP09234 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNRPCP09234 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNRPCP09234 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.35■□□□□ 0.85
SNRPCP09234 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNRPCP09234 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNRPCP09234 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SNRPCP09234 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNRPCP09234 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNRPCP09234 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNRPCP09234 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.34■□□□□ 0.85
SNRPCP09234 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNRPCP09234 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SNRPCP09234 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNRPCP09234 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SNRPCP09234 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SNRPCP09234 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNRPCP09234 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.33■□□□□ 0.84
SNRPCP09234 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNRPCP09234 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.32■□□□□ 0.84
SNRPCP09234 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SNRPCP09234 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNRPCP09234 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SNRPCP09234 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNRPCP09234 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNRPCP09234 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.31■□□□□ 0.84
SNRPCP09234 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNRPCP09234 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SNRPCP09234 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNRPCP09234 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.31■□□□□ 0.84
SNRPCP09234 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRPCP09234 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.3■□□□□ 0.84
SNRPCP09234 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRPCP09234 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRPCP09234 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRPCP09234 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.3■□□□□ 0.84
SNRPCP09234 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.29■□□□□ 0.84
SNRPCP09234 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SNRPCP09234 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SNRPCP09234 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNRPCP09234 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SNRPCP09234 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.27■□□□□ 0.84
SNRPCP09234 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.27■□□□□ 0.84
SNRPCP09234 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNRPCP09234 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.27■□□□□ 0.84
SNRPCP09234 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.27■□□□□ 0.84
SNRPCP09234 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.27■□□□□ 0.84
SNRPCP09234 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SNRPCP09234 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SNRPCP09234 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.26■□□□□ 0.83
SNRPCP09234 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.26■□□□□ 0.83
SNRPCP09234 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNRPCP09234 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNRPCP09234 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNRPCP09234 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SNRPCP09234 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.25■□□□□ 0.83
SNRPCP09234 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNRPCP09234 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.25■□□□□ 0.83
SNRPCP09234 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SNRPCP09234 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNRPCP09234 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNRPCP09234 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SNRPCP09234 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SNRPCP09234 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SNRPCP09234 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNRPCP09234 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNRPCP09234 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNRPCP09234 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNRPCP09234 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNRPCP09234 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNRPCP09234 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNRPCP09234 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.21■□□□□ 0.83
SNRPCP09234 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SNRPCP09234 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SNRPCP09234 AL139393.2-201ENST00000608721 2025 ntBASIC20.2■□□□□ 0.82
SNRPCP09234 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms