Protein–RNA interactions for Protein: P04628

WNT1, Proto-oncogene Wnt-1, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT1P04628 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
WNT1P04628 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
WNT1P04628 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
WNT1P04628 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
WNT1P04628 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
WNT1P04628 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
WNT1P04628 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.15■■□□□ 1.78
WNT1P04628 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.14■■□□□ 1.77
WNT1P04628 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.14■■□□□ 1.77
WNT1P04628 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.77
WNT1P04628 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
WNT1P04628 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
WNT1P04628 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.13■■□□□ 1.77
WNT1P04628 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.13■■□□□ 1.77
WNT1P04628 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
WNT1P04628 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
WNT1P04628 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
WNT1P04628 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
WNT1P04628 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
WNT1P04628 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.11■■□□□ 1.77
WNT1P04628 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.11■■□□□ 1.77
WNT1P04628 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
WNT1P04628 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.1■■□□□ 1.77
WNT1P04628 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
WNT1P04628 AL161658.1-201ENST00000623641 1967 ntBASIC26.09■■□□□ 1.77
WNT1P04628 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
WNT1P04628 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
WNT1P04628 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.09■■□□□ 1.77
WNT1P04628 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.76
WNT1P04628 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
WNT1P04628 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
WNT1P04628 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
WNT1P04628 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
WNT1P04628 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.06■■□□□ 1.76
WNT1P04628 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.06■■□□□ 1.76
WNT1P04628 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.06■■□□□ 1.76
WNT1P04628 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
WNT1P04628 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
WNT1P04628 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
WNT1P04628 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.05■■□□□ 1.76
WNT1P04628 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
WNT1P04628 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
WNT1P04628 DUX4L13-201ENST00000554103 1267 ntBASIC26.04■■□□□ 1.76
WNT1P04628 DUX4L15-201ENST00000611059 1267 ntBASIC26.04■■□□□ 1.76
WNT1P04628 DUX4L23-201ENST00000615195 1269 ntBASIC26.04■■□□□ 1.76
WNT1P04628 DUX4L24-201ENST00000617576 1269 ntBASIC26.04■■□□□ 1.76
WNT1P04628 DUX4L22-201ENST00000618238 1269 ntBASIC26.04■■□□□ 1.76
WNT1P04628 DUX4L20-201ENST00000619712 1269 ntBASIC26.04■■□□□ 1.76
WNT1P04628 DUX4L21-201ENST00000622058 1269 ntBASIC26.04■■□□□ 1.76
WNT1P04628 DUX4L10-201ENST00000622460 1267 ntBASIC26.04■■□□□ 1.76
WNT1P04628 DUX4L25-201ENST00000624915 1269 ntBASIC26.04■■□□□ 1.76
WNT1P04628 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
WNT1P04628 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.03■■□□□ 1.76
WNT1P04628 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
WNT1P04628 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
WNT1P04628 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
WNT1P04628 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26■■□□□ 1.75
WNT1P04628 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
WNT1P04628 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
WNT1P04628 HSD17B1P1-201ENST00000590052 955 ntBASIC25.99■■□□□ 1.75
WNT1P04628 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.99■■□□□ 1.75
WNT1P04628 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.98■■□□□ 1.75
WNT1P04628 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.98■■□□□ 1.75
WNT1P04628 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
WNT1P04628 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
WNT1P04628 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
WNT1P04628 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
WNT1P04628 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
WNT1P04628 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.96■■□□□ 1.75
WNT1P04628 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.95■■□□□ 1.74
WNT1P04628 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
WNT1P04628 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.95■■□□□ 1.74
WNT1P04628 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
WNT1P04628 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.94■■□□□ 1.74
WNT1P04628 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
WNT1P04628 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
WNT1P04628 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
WNT1P04628 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
WNT1P04628 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
WNT1P04628 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
WNT1P04628 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.9■■□□□ 1.74
WNT1P04628 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
WNT1P04628 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.9■■□□□ 1.74
WNT1P04628 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
WNT1P04628 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.9■■□□□ 1.74
WNT1P04628 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.89■■□□□ 1.74
WNT1P04628 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.89■■□□□ 1.74
WNT1P04628 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
WNT1P04628 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.88■■□□□ 1.73
WNT1P04628 AC010864.1-201ENST00000609407 1511 ntBASIC25.88■■□□□ 1.73
WNT1P04628 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.88■■□□□ 1.73
WNT1P04628 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.87■■□□□ 1.73
WNT1P04628 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.86■■□□□ 1.73
WNT1P04628 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.85■■□□□ 1.73
WNT1P04628 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
WNT1P04628 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
WNT1P04628 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
WNT1P04628 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
WNT1P04628 LINC00273-201ENST00000539813 1452 ntBASIC25.83■■□□□ 1.73
WNT1P04628 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms