Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SOD1P00441 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SOD1P00441 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SOD1P00441 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SOD1P00441 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SOD1P00441 AC010864.1-201ENST00000609407 1511 ntBASIC26.16■■□□□ 1.78
SOD1P00441 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SOD1P00441 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.16■■□□□ 1.78
SOD1P00441 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
SOD1P00441 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SOD1P00441 AL135925.1-201ENST00000605920 1701 ntBASIC26.14■■□□□ 1.77
SOD1P00441 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.13■■□□□ 1.77
SOD1P00441 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
SOD1P00441 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
SOD1P00441 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.12■■□□□ 1.77
SOD1P00441 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SOD1P00441 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.12■■□□□ 1.77
SOD1P00441 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.12■■□□□ 1.77
SOD1P00441 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
SOD1P00441 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SOD1P00441 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SOD1P00441 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SOD1P00441 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.1■■□□□ 1.77
SOD1P00441 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SOD1P00441 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.08■■□□□ 1.77
SOD1P00441 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.08■■□□□ 1.77
SOD1P00441 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.08■■□□□ 1.77
SOD1P00441 ABHD17AP4-201ENST00000411545 909 ntBASIC26.07■■□□□ 1.76
SOD1P00441 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.07■■□□□ 1.76
SOD1P00441 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.07■■□□□ 1.76
SOD1P00441 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.07■■□□□ 1.76
SOD1P00441 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SOD1P00441 AC021231.2-201ENST00000594613 730 ntBASIC26.06■■□□□ 1.76
SOD1P00441 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.05■■□□□ 1.76
SOD1P00441 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.05■■□□□ 1.76
SOD1P00441 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.05■■□□□ 1.76
SOD1P00441 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.04■■□□□ 1.76
SOD1P00441 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
SOD1P00441 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SOD1P00441 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SOD1P00441 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SOD1P00441 DUX4L29-201ENST00000425409 679 ntBASIC26.03■■□□□ 1.76
SOD1P00441 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
SOD1P00441 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SOD1P00441 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.02■■□□□ 1.76
SOD1P00441 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.01■■□□□ 1.75
SOD1P00441 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.01■■□□□ 1.75
SOD1P00441 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SOD1P00441 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26■■□□□ 1.75
SOD1P00441 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26■■□□□ 1.75
SOD1P00441 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.99■■□□□ 1.75
SOD1P00441 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SOD1P00441 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SOD1P00441 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SOD1P00441 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
SOD1P00441 ST7-AS1-201ENST00000456775 1889 ntBASIC25.97■■□□□ 1.75
SOD1P00441 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SOD1P00441 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SOD1P00441 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SOD1P00441 ZNRF2P2-203ENST00000454624 420 ntBASIC25.96■■□□□ 1.75
SOD1P00441 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.96■■□□□ 1.75
SOD1P00441 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
SOD1P00441 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
SOD1P00441 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SOD1P00441 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SOD1P00441 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SOD1P00441 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SOD1P00441 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.92■■□□□ 1.74
SOD1P00441 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
SOD1P00441 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
SOD1P00441 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SOD1P00441 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
SOD1P00441 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.92■■□□□ 1.74
SOD1P00441 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
SOD1P00441 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
SOD1P00441 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SOD1P00441 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.91■■□□□ 1.74
SOD1P00441 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SOD1P00441 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SOD1P00441 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SOD1P00441 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
SOD1P00441 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
SOD1P00441 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.89■■□□□ 1.74
SOD1P00441 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
SOD1P00441 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
SOD1P00441 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SOD1P00441 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.88■■□□□ 1.73
SOD1P00441 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.88■■□□□ 1.73
SOD1P00441 MIR7108-201ENST00000614319 87 ntBASIC25.88■■□□□ 1.73
SOD1P00441 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SOD1P00441 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SOD1P00441 AC127502.1-201ENST00000399971 1502 ntBASIC25.87■■□□□ 1.73
SOD1P00441 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SOD1P00441 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
SOD1P00441 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
SOD1P00441 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
SOD1P00441 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SOD1P00441 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.84■■□□□ 1.73
SOD1P00441 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SOD1P00441 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.83■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms