Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TOMM40O96008 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TOMM40O96008 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TOMM40O96008 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TOMM40O96008 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
TOMM40O96008 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TOMM40O96008 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TOMM40O96008 SETD8P1-201ENST00000623146 1180 ntBASIC20.39■□□□□ 0.85
TOMM40O96008 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TOMM40O96008 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.39■□□□□ 0.85
TOMM40O96008 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TOMM40O96008 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TOMM40O96008 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TOMM40O96008 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TOMM40O96008 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.37■□□□□ 0.85
TOMM40O96008 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
TOMM40O96008 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TOMM40O96008 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TOMM40O96008 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TOMM40O96008 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.36■□□□□ 0.85
TOMM40O96008 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TOMM40O96008 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.35■□□□□ 0.85
TOMM40O96008 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TOMM40O96008 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.35■□□□□ 0.85
TOMM40O96008 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TOMM40O96008 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.34■□□□□ 0.85
TOMM40O96008 AC010864.1-201ENST00000609407 1511 ntBASIC20.34■□□□□ 0.85
TOMM40O96008 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.34■□□□□ 0.85
TOMM40O96008 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TOMM40O96008 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
TOMM40O96008 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TOMM40O96008 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.33■□□□□ 0.85
TOMM40O96008 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TOMM40O96008 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TOMM40O96008 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.32■□□□□ 0.84
TOMM40O96008 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TOMM40O96008 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TOMM40O96008 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TOMM40O96008 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.32■□□□□ 0.84
TOMM40O96008 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.32■□□□□ 0.84
TOMM40O96008 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TOMM40O96008 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TOMM40O96008 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TOMM40O96008 AL139393.2-201ENST00000608721 2025 ntBASIC20.31■□□□□ 0.84
TOMM40O96008 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TOMM40O96008 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TOMM40O96008 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TOMM40O96008 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TOMM40O96008 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TOMM40O96008 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TOMM40O96008 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TOMM40O96008 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.29■□□□□ 0.84
TOMM40O96008 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TOMM40O96008 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TOMM40O96008 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TOMM40O96008 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.28■□□□□ 0.84
TOMM40O96008 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TOMM40O96008 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
TOMM40O96008 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TOMM40O96008 AC142086.6-201ENST00000621154 1765 ntBASIC20.26■□□□□ 0.83
TOMM40O96008 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TOMM40O96008 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TOMM40O96008 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TOMM40O96008 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TOMM40O96008 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TOMM40O96008 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TOMM40O96008 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TOMM40O96008 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.24■□□□□ 0.83
TOMM40O96008 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TOMM40O96008 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TOMM40O96008 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.24■□□□□ 0.83
TOMM40O96008 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TOMM40O96008 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.24■□□□□ 0.83
TOMM40O96008 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TOMM40O96008 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TOMM40O96008 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TOMM40O96008 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.22■□□□□ 0.83
TOMM40O96008 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TOMM40O96008 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.22■□□□□ 0.83
TOMM40O96008 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TOMM40O96008 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.21■□□□□ 0.83
TOMM40O96008 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.21■□□□□ 0.83
TOMM40O96008 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TOMM40O96008 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TOMM40O96008 AL391121.1-201ENST00000607967 1349 ntBASIC20.21■□□□□ 0.83
TOMM40O96008 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TOMM40O96008 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TOMM40O96008 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TOMM40O96008 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TOMM40O96008 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TOMM40O96008 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TOMM40O96008 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TOMM40O96008 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.19■□□□□ 0.82
TOMM40O96008 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
TOMM40O96008 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
TOMM40O96008 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TOMM40O96008 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TOMM40O96008 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOMM40O96008 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TOMM40O96008 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms