Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC41.81■■■■■ 4.28
PCF11O94913 LINC01971-201ENST00000617888 1048 ntBASIC41.8■■■■■ 4.28
PCF11O94913 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC41.8■■■■■ 4.28
PCF11O94913 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC41.8■■■■■ 4.28
PCF11O94913 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC41.79■■■■■ 4.28
PCF11O94913 HSD17B1P1-201ENST00000590052 955 ntBASIC41.78■■■■■ 4.28
PCF11O94913 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC41.78■■■■■ 4.28
PCF11O94913 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC41.76■■■■■ 4.27
PCF11O94913 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC41.75■■■■■ 4.27
PCF11O94913 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC41.75■■■■■ 4.27
PCF11O94913 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC41.75■■■■■ 4.27
PCF11O94913 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC41.75■■■■■ 4.27
PCF11O94913 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC41.74■■■■■ 4.27
PCF11O94913 GDI1-215ENST00000630693 786 ntTSL 4 BASIC41.73■■■■■ 4.27
PCF11O94913 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC41.73■■■■■ 4.27
PCF11O94913 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC41.73■■■■■ 4.27
PCF11O94913 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC41.72■■■■■ 4.27
PCF11O94913 DUX4L11-201ENST00000611504 1267 ntBASIC41.72■■■■■ 4.27
PCF11O94913 DUX4L12-201ENST00000614593 1267 ntBASIC41.72■■■■■ 4.27
PCF11O94913 DUX4L14-201ENST00000621227 1267 ntBASIC41.72■■■■■ 4.27
PCF11O94913 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC41.71■■■■■ 4.27
PCF11O94913 AC016575.1-201ENST00000607026 382 ntBASIC41.71■■■■■ 4.27
PCF11O94913 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC41.7■■■■■ 4.27
PCF11O94913 MIR3648-2-201ENST00000581792 180 ntBASIC41.7■■■■■ 4.27
PCF11O94913 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC41.7■■■■■ 4.27
PCF11O94913 MIR3648-1-201ENST00000615959 180 ntBASIC41.7■■■■■ 4.27
PCF11O94913 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC41.67■■■■■ 4.26
PCF11O94913 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC41.67■■■■■ 4.26
PCF11O94913 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC41.67■■■■■ 4.26
PCF11O94913 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC41.67■■■■■ 4.26
PCF11O94913 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC41.67■■■■■ 4.26
PCF11O94913 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC41.66■■■■■ 4.26
PCF11O94913 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC41.66■■■■■ 4.26
PCF11O94913 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC41.64■■■■■ 4.26
PCF11O94913 MIR639-201ENST00000384974 98 ntBASIC41.63■■■■■ 4.26
PCF11O94913 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC41.63■■■■■ 4.26
PCF11O94913 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC41.63■■■■■ 4.25
PCF11O94913 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC41.63■■■■■ 4.25
PCF11O94913 BRD4-212ENST00000630599 726 ntTSL 2 BASIC41.63■■■■■ 4.25
PCF11O94913 EI24-212ENST00000615917 1407 ntTSL 2 BASIC41.61■■■■■ 4.25
PCF11O94913 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC41.59■■■■■ 4.25
PCF11O94913 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC41.59■■■■■ 4.25
PCF11O94913 AC010864.1-201ENST00000609407 1511 ntBASIC41.58■■■■■ 4.25
PCF11O94913 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC41.58■■■■■ 4.25
PCF11O94913 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC41.57■■■■■ 4.25
PCF11O94913 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC41.57■■■■■ 4.24
PCF11O94913 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC41.55■■■■■ 4.24
PCF11O94913 AGPS-202ENST00000409888 815 ntTSL 4 BASIC41.55■■■■■ 4.24
PCF11O94913 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC41.55■■■■■ 4.24
PCF11O94913 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC41.54■■■■■ 4.24
PCF11O94913 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC41.54■■■■■ 4.24
PCF11O94913 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC41.54■■■■■ 4.24
PCF11O94913 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC41.54■■■■■ 4.24
PCF11O94913 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC41.53■■■■■ 4.24
PCF11O94913 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC41.51■■■■■ 4.24
PCF11O94913 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC41.5■■■■■ 4.23
PCF11O94913 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC41.5■■■■■ 4.23
PCF11O94913 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC41.5■■■■■ 4.23
PCF11O94913 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC41.5■■■■■ 4.23
PCF11O94913 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC41.49■■■■■ 4.23
PCF11O94913 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC41.49■■■■■ 4.23
PCF11O94913 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC41.46■■■■■ 4.23
PCF11O94913 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC41.46■■■■■ 4.23
PCF11O94913 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC41.46■■■■■ 4.23
PCF11O94913 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC41.45■■■■■ 4.23
PCF11O94913 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC41.45■■■■■ 4.23
PCF11O94913 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC41.44■■■■■ 4.22
PCF11O94913 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC41.44■■■■■ 4.22
PCF11O94913 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC41.43■■■■■ 4.22
PCF11O94913 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC41.43■■■■■ 4.22
PCF11O94913 LINC00273-201ENST00000539813 1452 ntBASIC41.43■■■■■ 4.22
PCF11O94913 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC41.42■■■■■ 4.22
PCF11O94913 CALM3-209ENST00000597743 577 ntTSL 4 BASIC41.42■■■■■ 4.22
PCF11O94913 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC41.41■■■■■ 4.22
PCF11O94913 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC41.4■■■■■ 4.22
PCF11O94913 DUX4L13-201ENST00000554103 1267 ntBASIC41.4■■■■■ 4.22
PCF11O94913 DUX4L15-201ENST00000611059 1267 ntBASIC41.4■■■■■ 4.22
PCF11O94913 DUX4L23-201ENST00000615195 1269 ntBASIC41.4■■■■■ 4.22
PCF11O94913 DUX4L24-201ENST00000617576 1269 ntBASIC41.4■■■■■ 4.22
PCF11O94913 DUX4L22-201ENST00000618238 1269 ntBASIC41.4■■■■■ 4.22
PCF11O94913 DUX4L20-201ENST00000619712 1269 ntBASIC41.4■■■■■ 4.22
PCF11O94913 DUX4L21-201ENST00000622058 1269 ntBASIC41.4■■■■■ 4.22
PCF11O94913 DUX4L10-201ENST00000622460 1267 ntBASIC41.4■■■■■ 4.22
PCF11O94913 DUX4L25-201ENST00000624915 1269 ntBASIC41.4■■■■■ 4.22
PCF11O94913 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC41.39■■■■■ 4.22
PCF11O94913 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC41.39■■■■■ 4.22
PCF11O94913 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC41.38■■■■■ 4.22
PCF11O94913 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC41.38■■■■■ 4.21
PCF11O94913 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC41.36■■■■■ 4.21
PCF11O94913 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC41.36■■■■■ 4.21
PCF11O94913 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC41.36■■■■■ 4.21
PCF11O94913 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC41.36■■■■■ 4.21
PCF11O94913 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC41.35■■■■■ 4.21
PCF11O94913 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC41.34■■■■■ 4.21
PCF11O94913 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC41.33■■■■■ 4.21
PCF11O94913 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC41.32■■■■■ 4.21
PCF11O94913 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC41.32■■■■■ 4.21
PCF11O94913 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC41.28■■■■■ 4.2
PCF11O94913 CHML-204ENST00000638121 920 ntTSL 2 BASIC41.28■■■■■ 4.2
PCF11O94913 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC41.27■■■■■ 4.2
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms