Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
USP1O94782 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
USP1O94782 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.46■■□□□ 1.83
USP1O94782 AC010864.1-201ENST00000609407 1511 ntBASIC26.46■■□□□ 1.83
USP1O94782 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
USP1O94782 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
USP1O94782 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
USP1O94782 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.44■■□□□ 1.82
USP1O94782 AL391121.1-201ENST00000607967 1349 ntBASIC26.43■■□□□ 1.82
USP1O94782 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
USP1O94782 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
USP1O94782 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
USP1O94782 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
USP1O94782 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
USP1O94782 AC136428.2-201ENST00000563187 214 ntBASIC26.41■■□□□ 1.82
USP1O94782 AC097358.2-201ENST00000607541 1159 ntBASIC26.41■■□□□ 1.82
USP1O94782 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
USP1O94782 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.4■■□□□ 1.82
USP1O94782 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
USP1O94782 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.4■■□□□ 1.82
USP1O94782 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
USP1O94782 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
USP1O94782 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
USP1O94782 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
USP1O94782 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
USP1O94782 AL139393.2-201ENST00000608721 2025 ntBASIC26.39■■□□□ 1.81
USP1O94782 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
USP1O94782 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
USP1O94782 CAHM-201ENST00000604200 896 ntBASIC26.38■■□□□ 1.81
USP1O94782 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
USP1O94782 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
USP1O94782 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
USP1O94782 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
USP1O94782 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
USP1O94782 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
USP1O94782 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
USP1O94782 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
USP1O94782 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.36■■□□□ 1.81
USP1O94782 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.35■■□□□ 1.81
USP1O94782 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.35■■□□□ 1.81
USP1O94782 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
USP1O94782 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
USP1O94782 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.34■■□□□ 1.81
USP1O94782 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
USP1O94782 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
USP1O94782 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
USP1O94782 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
USP1O94782 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
USP1O94782 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
USP1O94782 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
USP1O94782 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
USP1O94782 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.3■■□□□ 1.8
USP1O94782 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
USP1O94782 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.3■■□□□ 1.8
USP1O94782 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
USP1O94782 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
USP1O94782 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.29■■□□□ 1.8
USP1O94782 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
USP1O94782 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
USP1O94782 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.28■■□□□ 1.8
USP1O94782 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
USP1O94782 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
USP1O94782 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
USP1O94782 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
USP1O94782 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
USP1O94782 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.24■■□□□ 1.79
USP1O94782 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.24■■□□□ 1.79
USP1O94782 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
USP1O94782 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
USP1O94782 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
USP1O94782 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
USP1O94782 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
USP1O94782 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
USP1O94782 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
USP1O94782 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.22■■□□□ 1.79
USP1O94782 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
USP1O94782 AC142086.6-201ENST00000621154 1765 ntBASIC26.2■■□□□ 1.78
USP1O94782 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
USP1O94782 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.19■■□□□ 1.78
USP1O94782 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.19■■□□□ 1.78
USP1O94782 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
USP1O94782 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
USP1O94782 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.19■■□□□ 1.78
USP1O94782 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.18■■□□□ 1.78
USP1O94782 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
USP1O94782 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
USP1O94782 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
USP1O94782 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.17■■□□□ 1.78
USP1O94782 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.17■■□□□ 1.78
USP1O94782 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.16■■□□□ 1.78
USP1O94782 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.16■■□□□ 1.78
USP1O94782 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
USP1O94782 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.15■■□□□ 1.78
USP1O94782 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
USP1O94782 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.14■■□□□ 1.78
USP1O94782 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.14■■□□□ 1.78
USP1O94782 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.14■■□□□ 1.78
USP1O94782 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.14■■□□□ 1.78
USP1O94782 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
USP1O94782 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms