Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHGA12O60330 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHGA12O60330 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.13■■□□□ 1.77
PCDHGA12O60330 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.12■■□□□ 1.77
PCDHGA12O60330 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHGA12O60330 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.12■■□□□ 1.77
PCDHGA12O60330 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHGA12O60330 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHGA12O60330 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.11■■□□□ 1.77
PCDHGA12O60330 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHGA12O60330 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHGA12O60330 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHGA12O60330 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.11■■□□□ 1.77
PCDHGA12O60330 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.11■■□□□ 1.77
PCDHGA12O60330 HSD17B1P1-201ENST00000590052 955 ntBASIC26.11■■□□□ 1.77
PCDHGA12O60330 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.11■■□□□ 1.77
PCDHGA12O60330 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
PCDHGA12O60330 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.1■■□□□ 1.77
PCDHGA12O60330 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHGA12O60330 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHGA12O60330 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHGA12O60330 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHGA12O60330 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHGA12O60330 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.07■■□□□ 1.76
PCDHGA12O60330 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHGA12O60330 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHGA12O60330 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.06■■□□□ 1.76
PCDHGA12O60330 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHGA12O60330 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHGA12O60330 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHGA12O60330 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
PCDHGA12O60330 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHGA12O60330 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
PCDHGA12O60330 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHGA12O60330 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHGA12O60330 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.03■■□□□ 1.76
PCDHGA12O60330 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHGA12O60330 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHGA12O60330 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26■■□□□ 1.75
PCDHGA12O60330 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHGA12O60330 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26■■□□□ 1.75
PCDHGA12O60330 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHGA12O60330 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.99■■□□□ 1.75
PCDHGA12O60330 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHGA12O60330 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.98■■□□□ 1.75
PCDHGA12O60330 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
PCDHGA12O60330 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHGA12O60330 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.96■■□□□ 1.75
PCDHGA12O60330 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHGA12O60330 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.96■■□□□ 1.75
PCDHGA12O60330 DUX4L13-201ENST00000554103 1267 ntBASIC25.96■■□□□ 1.75
PCDHGA12O60330 DUX4L15-201ENST00000611059 1267 ntBASIC25.96■■□□□ 1.75
PCDHGA12O60330 DUX4L23-201ENST00000615195 1269 ntBASIC25.96■■□□□ 1.75
PCDHGA12O60330 DUX4L24-201ENST00000617576 1269 ntBASIC25.96■■□□□ 1.75
PCDHGA12O60330 DUX4L22-201ENST00000618238 1269 ntBASIC25.96■■□□□ 1.75
PCDHGA12O60330 DUX4L20-201ENST00000619712 1269 ntBASIC25.96■■□□□ 1.75
PCDHGA12O60330 DUX4L21-201ENST00000622058 1269 ntBASIC25.96■■□□□ 1.75
PCDHGA12O60330 DUX4L10-201ENST00000622460 1267 ntBASIC25.96■■□□□ 1.75
PCDHGA12O60330 DUX4L25-201ENST00000624915 1269 ntBASIC25.96■■□□□ 1.75
PCDHGA12O60330 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHGA12O60330 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.95■■□□□ 1.74
PCDHGA12O60330 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHGA12O60330 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
PCDHGA12O60330 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHGA12O60330 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.93■■□□□ 1.74
PCDHGA12O60330 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.93■■□□□ 1.74
PCDHGA12O60330 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
PCDHGA12O60330 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.92■■□□□ 1.74
PCDHGA12O60330 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.92■■□□□ 1.74
PCDHGA12O60330 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.92■■□□□ 1.74
PCDHGA12O60330 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHGA12O60330 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHGA12O60330 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHGA12O60330 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHGA12O60330 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHGA12O60330 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHGA12O60330 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
PCDHGA12O60330 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHGA12O60330 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHGA12O60330 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
PCDHGA12O60330 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.89■■□□□ 1.74
PCDHGA12O60330 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHGA12O60330 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHGA12O60330 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.88■■□□□ 1.73
PCDHGA12O60330 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.87■■□□□ 1.73
PCDHGA12O60330 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHGA12O60330 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHGA12O60330 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.86■■□□□ 1.73
PCDHGA12O60330 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.85■■□□□ 1.73
PCDHGA12O60330 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHGA12O60330 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.85■■□□□ 1.73
PCDHGA12O60330 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHGA12O60330 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHGA12O60330 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHGA12O60330 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.84■■□□□ 1.73
PCDHGA12O60330 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.83■■□□□ 1.73
PCDHGA12O60330 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHGA12O60330 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
PCDHGA12O60330 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.81■■□□□ 1.72
PCDHGA12O60330 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms