Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.19■■■□□ 2.26
SOX1O00570 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
SOX1O00570 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
SOX1O00570 TPT1-202ENST00000379055 948 ntTSL 2 BASIC29.17■■■□□ 2.26
SOX1O00570 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC29.17■■■□□ 2.26
SOX1O00570 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
SOX1O00570 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
SOX1O00570 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
SOX1O00570 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
SOX1O00570 CEP120-209ENST00000515110 606 ntTSL 3 BASIC29.14■■■□□ 2.26
SOX1O00570 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
SOX1O00570 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC29.13■■■□□ 2.25
SOX1O00570 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC29.13■■■□□ 2.25
SOX1O00570 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
SOX1O00570 CHML-204ENST00000638121 920 ntTSL 2 BASIC29.11■■■□□ 2.25
SOX1O00570 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
SOX1O00570 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
SOX1O00570 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC29.1■■■□□ 2.25
SOX1O00570 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SOX1O00570 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
SOX1O00570 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
SOX1O00570 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.05■■■□□ 2.24
SOX1O00570 AL592295.1-201ENST00000400984 884 ntBASIC29.05■■■□□ 2.24
SOX1O00570 RARRES2P1-201ENST00000474487 481 ntBASIC29.05■■■□□ 2.24
SOX1O00570 MTURN-203ENST00000409688 843 ntTSL 2 BASIC29.04■■■□□ 2.24
SOX1O00570 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
SOX1O00570 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC29.02■■■□□ 2.24
SOX1O00570 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
SOX1O00570 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC29.01■■■□□ 2.23
SOX1O00570 GFER-205ENST00000569451 517 ntTSL 5 BASIC29.01■■■□□ 2.23
SOX1O00570 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC29.01■■■□□ 2.23
SOX1O00570 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC29.01■■■□□ 2.23
SOX1O00570 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29■■■□□ 2.23
SOX1O00570 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC29■■■□□ 2.23
SOX1O00570 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.99■■■□□ 2.23
SOX1O00570 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC28.98■■■□□ 2.23
SOX1O00570 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.98■■■□□ 2.23
SOX1O00570 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC28.98■■■□□ 2.23
SOX1O00570 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.98■■■□□ 2.23
SOX1O00570 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
SOX1O00570 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.22
SOX1O00570 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
SOX1O00570 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
SOX1O00570 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
SOX1O00570 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC28.94■■■□□ 2.22
SOX1O00570 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
SOX1O00570 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
SOX1O00570 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC28.93■■■□□ 2.22
SOX1O00570 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
SOX1O00570 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
SOX1O00570 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
SOX1O00570 AC022413.1-201ENST00000624602 984 ntBASIC28.92■■■□□ 2.22
SOX1O00570 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
SOX1O00570 U85056.1-201ENST00000616429 682 ntBASIC28.91■■■□□ 2.22
SOX1O00570 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
SOX1O00570 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
SOX1O00570 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
SOX1O00570 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
SOX1O00570 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC28.89■■■□□ 2.22
SOX1O00570 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.89■■■□□ 2.22
SOX1O00570 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
SOX1O00570 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
SOX1O00570 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC28.88■■■□□ 2.21
SOX1O00570 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC28.88■■■□□ 2.21
SOX1O00570 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
SOX1O00570 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
SOX1O00570 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SOX1O00570 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SOX1O00570 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
SOX1O00570 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
SOX1O00570 TSPY13P-201ENST00000338964 914 ntBASIC28.82■■■□□ 2.2
SOX1O00570 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC28.82■■■□□ 2.2
SOX1O00570 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC28.82■■■□□ 2.2
SOX1O00570 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
SOX1O00570 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC28.8■■■□□ 2.2
SOX1O00570 AC004987.1-201ENST00000428627 508 ntBASIC28.8■■■□□ 2.2
SOX1O00570 HES4-202ENST00000428771 1040 ntTSL 2 BASIC28.78■■■□□ 2.2
SOX1O00570 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC28.77■■■□□ 2.2
SOX1O00570 HYI-213ENST00000583037 1322 ntTSL 5 BASIC28.76■■■□□ 2.19
SOX1O00570 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.76■■■□□ 2.19
SOX1O00570 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC28.76■■■□□ 2.19
SOX1O00570 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SOX1O00570 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
SOX1O00570 GUK1-208ENST00000366728 842 ntTSL 2 BASIC28.75■■■□□ 2.19
SOX1O00570 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
SOX1O00570 ATP5G2P3-201ENST00000429083 425 ntBASIC28.74■■■□□ 2.19
SOX1O00570 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SOX1O00570 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.73■■■□□ 2.19
SOX1O00570 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC28.73■■■□□ 2.19
SOX1O00570 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SOX1O00570 HES4-204ENST00000484667 667 ntTSL 3 BASIC28.72■■■□□ 2.19
SOX1O00570 AL035685.1-201ENST00000636663 812 ntBASIC28.72■■■□□ 2.19
SOX1O00570 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC28.71■■■□□ 2.19
SOX1O00570 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
SOX1O00570 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.68■■■□□ 2.18
SOX1O00570 KRT18P60-201ENST00000312876 1297 ntBASIC28.68■■■□□ 2.18
SOX1O00570 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SOX1O00570 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.68■■■□□ 2.18
SOX1O00570 MIR935-201ENST00000401179 91 ntBASIC28.67■■■□□ 2.18
SOX1O00570 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms