Protein–RNA interactions for Protein: A5X5Y0

HTR3E, 5-hydroxytryptamine receptor 3E, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3EA5X5Y0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
HTR3EA5X5Y0 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
HTR3EA5X5Y0 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
HTR3EA5X5Y0 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
HTR3EA5X5Y0 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC24.01■■□□□ 1.43
HTR3EA5X5Y0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
HTR3EA5X5Y0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24■■□□□ 1.43
HTR3EA5X5Y0 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
HTR3EA5X5Y0 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
HTR3EA5X5Y0 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
HTR3EA5X5Y0 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.99■■□□□ 1.43
HTR3EA5X5Y0 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.99■■□□□ 1.43
HTR3EA5X5Y0 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
HTR3EA5X5Y0 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
HTR3EA5X5Y0 RARRES2P7-201ENST00000567349 469 ntBASIC23.99■■□□□ 1.43
HTR3EA5X5Y0 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
HTR3EA5X5Y0 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
HTR3EA5X5Y0 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
HTR3EA5X5Y0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
HTR3EA5X5Y0 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
HTR3EA5X5Y0 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
HTR3EA5X5Y0 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
HTR3EA5X5Y0 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
HTR3EA5X5Y0 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
HTR3EA5X5Y0 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC23.95■■□□□ 1.42
HTR3EA5X5Y0 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC23.95■■□□□ 1.42
HTR3EA5X5Y0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.95■■□□□ 1.42
HTR3EA5X5Y0 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
HTR3EA5X5Y0 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
HTR3EA5X5Y0 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
HTR3EA5X5Y0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
HTR3EA5X5Y0 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
HTR3EA5X5Y0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
HTR3EA5X5Y0 SETD8P1-201ENST00000623146 1180 ntBASIC23.92■■□□□ 1.42
HTR3EA5X5Y0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
HTR3EA5X5Y0 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
HTR3EA5X5Y0 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
HTR3EA5X5Y0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
HTR3EA5X5Y0 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
HTR3EA5X5Y0 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
HTR3EA5X5Y0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.9■■□□□ 1.42
HTR3EA5X5Y0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
HTR3EA5X5Y0 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
HTR3EA5X5Y0 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HTR3EA5X5Y0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
HTR3EA5X5Y0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
HTR3EA5X5Y0 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HTR3EA5X5Y0 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HTR3EA5X5Y0 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
HTR3EA5X5Y0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
HTR3EA5X5Y0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.86■■□□□ 1.41
HTR3EA5X5Y0 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
HTR3EA5X5Y0 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HTR3EA5X5Y0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
HTR3EA5X5Y0 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
HTR3EA5X5Y0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
HTR3EA5X5Y0 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
HTR3EA5X5Y0 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC23.85■■□□□ 1.41
HTR3EA5X5Y0 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
HTR3EA5X5Y0 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
HTR3EA5X5Y0 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
HTR3EA5X5Y0 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.84■■□□□ 1.41
HTR3EA5X5Y0 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.84■■□□□ 1.41
HTR3EA5X5Y0 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
HTR3EA5X5Y0 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HTR3EA5X5Y0 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HTR3EA5X5Y0 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC23.83■■□□□ 1.41
HTR3EA5X5Y0 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HTR3EA5X5Y0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
HTR3EA5X5Y0 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
HTR3EA5X5Y0 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
HTR3EA5X5Y0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
HTR3EA5X5Y0 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
HTR3EA5X5Y0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.8■■□□□ 1.4
HTR3EA5X5Y0 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.8■■□□□ 1.4
HTR3EA5X5Y0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.8■■□□□ 1.4
HTR3EA5X5Y0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
HTR3EA5X5Y0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
HTR3EA5X5Y0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.79■■□□□ 1.4
HTR3EA5X5Y0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
HTR3EA5X5Y0 AC010864.1-201ENST00000609407 1511 ntBASIC23.79■■□□□ 1.4
HTR3EA5X5Y0 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HTR3EA5X5Y0 DENR-202ENST00000455982 1052 ntTSL 5 BASIC23.78■■□□□ 1.4
HTR3EA5X5Y0 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
HTR3EA5X5Y0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
HTR3EA5X5Y0 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HTR3EA5X5Y0 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC23.77■■□□□ 1.4
HTR3EA5X5Y0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HTR3EA5X5Y0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.76■■□□□ 1.39
HTR3EA5X5Y0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HTR3EA5X5Y0 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
HTR3EA5X5Y0 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HTR3EA5X5Y0 AL391121.1-201ENST00000607967 1349 ntBASIC23.74■■□□□ 1.39
HTR3EA5X5Y0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HTR3EA5X5Y0 EBPL-202ENST00000378268 680 ntTSL 3 BASIC23.73■■□□□ 1.39
HTR3EA5X5Y0 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
HTR3EA5X5Y0 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HTR3EA5X5Y0 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC23.72■■□□□ 1.39
HTR3EA5X5Y0 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
HTR3EA5X5Y0 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms