Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
IGKV3D-20A0A0C4DH25 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
IGKV3D-20A0A0C4DH25 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.45■□□□□ 0.7
IGKV3D-20A0A0C4DH25 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
IGKV3D-20A0A0C4DH25 AL139393.2-201ENST00000608721 2025 ntBASIC19.44■□□□□ 0.7
IGKV3D-20A0A0C4DH25 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.43■□□□□ 0.7
IGKV3D-20A0A0C4DH25 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
IGKV3D-20A0A0C4DH25 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
IGKV3D-20A0A0C4DH25 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
IGKV3D-20A0A0C4DH25 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IGKV3D-20A0A0C4DH25 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IGKV3D-20A0A0C4DH25 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IGKV3D-20A0A0C4DH25 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IGKV3D-20A0A0C4DH25 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IGKV3D-20A0A0C4DH25 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.4■□□□□ 0.7
IGKV3D-20A0A0C4DH25 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
IGKV3D-20A0A0C4DH25 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IGKV3D-20A0A0C4DH25 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IGKV3D-20A0A0C4DH25 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
IGKV3D-20A0A0C4DH25 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
IGKV3D-20A0A0C4DH25 WASH5P-204ENST00000632292 975 ntBASIC19.39■□□□□ 0.69
IGKV3D-20A0A0C4DH25 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
IGKV3D-20A0A0C4DH25 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.39■□□□□ 0.69
IGKV3D-20A0A0C4DH25 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
IGKV3D-20A0A0C4DH25 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
IGKV3D-20A0A0C4DH25 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
IGKV3D-20A0A0C4DH25 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
IGKV3D-20A0A0C4DH25 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
IGKV3D-20A0A0C4DH25 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
IGKV3D-20A0A0C4DH25 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
IGKV3D-20A0A0C4DH25 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
IGKV3D-20A0A0C4DH25 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.38■□□□□ 0.69
IGKV3D-20A0A0C4DH25 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
IGKV3D-20A0A0C4DH25 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
IGKV3D-20A0A0C4DH25 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
IGKV3D-20A0A0C4DH25 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
IGKV3D-20A0A0C4DH25 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IGKV3D-20A0A0C4DH25 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
IGKV3D-20A0A0C4DH25 DRD5P2-201ENST00000421395 2012 ntBASIC19.35■□□□□ 0.69
IGKV3D-20A0A0C4DH25 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.34■□□□□ 0.69
IGKV3D-20A0A0C4DH25 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.34■□□□□ 0.69
IGKV3D-20A0A0C4DH25 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
IGKV3D-20A0A0C4DH25 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
IGKV3D-20A0A0C4DH25 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IGKV3D-20A0A0C4DH25 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.32■□□□□ 0.68
IGKV3D-20A0A0C4DH25 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.32■□□□□ 0.68
IGKV3D-20A0A0C4DH25 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IGKV3D-20A0A0C4DH25 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
IGKV3D-20A0A0C4DH25 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IGKV3D-20A0A0C4DH25 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
IGKV3D-20A0A0C4DH25 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
IGKV3D-20A0A0C4DH25 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
IGKV3D-20A0A0C4DH25 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
IGKV3D-20A0A0C4DH25 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
IGKV3D-20A0A0C4DH25 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IGKV3D-20A0A0C4DH25 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IGKV3D-20A0A0C4DH25 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
IGKV3D-20A0A0C4DH25 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IGKV3D-20A0A0C4DH25 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
IGKV3D-20A0A0C4DH25 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
IGKV3D-20A0A0C4DH25 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
IGKV3D-20A0A0C4DH25 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IGKV3D-20A0A0C4DH25 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
IGKV3D-20A0A0C4DH25 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IGKV3D-20A0A0C4DH25 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
IGKV3D-20A0A0C4DH25 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.27■□□□□ 0.68
IGKV3D-20A0A0C4DH25 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
IGKV3D-20A0A0C4DH25 AL133380.1-201ENST00000506013 324 ntBASIC19.26■□□□□ 0.67
IGKV3D-20A0A0C4DH25 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IGKV3D-20A0A0C4DH25 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.24■□□□□ 0.67
IGKV3D-20A0A0C4DH25 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IGKV3D-20A0A0C4DH25 AC010864.1-201ENST00000609407 1511 ntBASIC19.24■□□□□ 0.67
IGKV3D-20A0A0C4DH25 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.23■□□□□ 0.67
IGKV3D-20A0A0C4DH25 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IGKV3D-20A0A0C4DH25 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.23■□□□□ 0.67
IGKV3D-20A0A0C4DH25 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.23■□□□□ 0.67
IGKV3D-20A0A0C4DH25 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IGKV3D-20A0A0C4DH25 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
IGKV3D-20A0A0C4DH25 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
IGKV3D-20A0A0C4DH25 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.21■□□□□ 0.67
IGKV3D-20A0A0C4DH25 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
IGKV3D-20A0A0C4DH25 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
IGKV3D-20A0A0C4DH25 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
IGKV3D-20A0A0C4DH25 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
IGKV3D-20A0A0C4DH25 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.21■□□□□ 0.67
IGKV3D-20A0A0C4DH25 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
IGKV3D-20A0A0C4DH25 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
IGKV3D-20A0A0C4DH25 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IGKV3D-20A0A0C4DH25 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
IGKV3D-20A0A0C4DH25 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
IGKV3D-20A0A0C4DH25 AL121749.1-202ENST00000609313 2153 ntBASIC19.19■□□□□ 0.66
IGKV3D-20A0A0C4DH25 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.18■□□□□ 0.66
IGKV3D-20A0A0C4DH25 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.18■□□□□ 0.66
IGKV3D-20A0A0C4DH25 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IGKV3D-20A0A0C4DH25 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.18■□□□□ 0.66
IGKV3D-20A0A0C4DH25 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IGKV3D-20A0A0C4DH25 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
IGKV3D-20A0A0C4DH25 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
IGKV3D-20A0A0C4DH25 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IGKV3D-20A0A0C4DH25 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms