Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TRAV8-3A0A0A6YYJ7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV8-3A0A0A6YYJ7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV8-3A0A0A6YYJ7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV8-3A0A0A6YYJ7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TRAV8-3A0A0A6YYJ7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV8-3A0A0A6YYJ7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
TRAV8-3A0A0A6YYJ7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV8-3A0A0A6YYJ7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
TRAV8-3A0A0A6YYJ7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV8-3A0A0A6YYJ7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV8-3A0A0A6YYJ7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TRAV8-3A0A0A6YYJ7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAV8-3A0A0A6YYJ7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV8-3A0A0A6YYJ7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRAV8-3A0A0A6YYJ7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAV8-3A0A0A6YYJ7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.29■□□□□ 0.52
TRAV8-3A0A0A6YYJ7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
TRAV8-3A0A0A6YYJ7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC18.29■□□□□ 0.52
TRAV8-3A0A0A6YYJ7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRAV8-3A0A0A6YYJ7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV8-3A0A0A6YYJ7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV8-3A0A0A6YYJ7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.28■□□□□ 0.52
TRAV8-3A0A0A6YYJ7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV8-3A0A0A6YYJ7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV8-3A0A0A6YYJ7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV8-3A0A0A6YYJ7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
TRAV8-3A0A0A6YYJ7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV8-3A0A0A6YYJ7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 AC136428.2-201ENST00000563187 214 ntBASIC18.26■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC18.24■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 WASH5P-204ENST00000632292 975 ntBASIC18.24■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 AC142086.6-201ENST00000621154 1765 ntBASIC18.22■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC18.22■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV8-3A0A0A6YYJ7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 AL391121.1-201ENST00000607967 1349 ntBASIC18.2■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC18.18■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.17■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC18.15■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRAV8-3A0A0A6YYJ7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV8-3A0A0A6YYJ7 CAHM-201ENST00000604200 896 ntBASIC18.14■□□□□ 0.49
TRAV8-3A0A0A6YYJ7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV8-3A0A0A6YYJ7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
TRAV8-3A0A0A6YYJ7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV8-3A0A0A6YYJ7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms