Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV30A0A087WSZ9 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRAV30A0A087WSZ9 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.46■□□□□ 0.87
TRAV30A0A087WSZ9 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.45■□□□□ 0.86
TRAV30A0A087WSZ9 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.45■□□□□ 0.86
TRAV30A0A087WSZ9 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV30A0A087WSZ9 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV30A0A087WSZ9 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV30A0A087WSZ9 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRAV30A0A087WSZ9 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV30A0A087WSZ9 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV30A0A087WSZ9 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV30A0A087WSZ9 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV30A0A087WSZ9 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TRAV30A0A087WSZ9 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV30A0A087WSZ9 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV30A0A087WSZ9 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV30A0A087WSZ9 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.43■□□□□ 0.86
TRAV30A0A087WSZ9 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
TRAV30A0A087WSZ9 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV30A0A087WSZ9 AC010864.1-201ENST00000609407 1511 ntBASIC20.41■□□□□ 0.86
TRAV30A0A087WSZ9 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.41■□□□□ 0.86
TRAV30A0A087WSZ9 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV30A0A087WSZ9 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.41■□□□□ 0.86
TRAV30A0A087WSZ9 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV30A0A087WSZ9 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.39■□□□□ 0.86
TRAV30A0A087WSZ9 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRAV30A0A087WSZ9 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRAV30A0A087WSZ9 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV30A0A087WSZ9 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TRAV30A0A087WSZ9 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TRAV30A0A087WSZ9 AC135731.1-201ENST00000569415 2548 ntBASIC20.36■□□□□ 0.85
TRAV30A0A087WSZ9 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV30A0A087WSZ9 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TRAV30A0A087WSZ9 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV30A0A087WSZ9 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TRAV30A0A087WSZ9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.35■□□□□ 0.85
TRAV30A0A087WSZ9 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.35■□□□□ 0.85
TRAV30A0A087WSZ9 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV30A0A087WSZ9 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.35■□□□□ 0.85
TRAV30A0A087WSZ9 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV30A0A087WSZ9 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.34■□□□□ 0.85
TRAV30A0A087WSZ9 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
TRAV30A0A087WSZ9 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV30A0A087WSZ9 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV30A0A087WSZ9 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.33■□□□□ 0.85
TRAV30A0A087WSZ9 AL391121.1-201ENST00000607967 1349 ntBASIC20.33■□□□□ 0.85
TRAV30A0A087WSZ9 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV30A0A087WSZ9 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV30A0A087WSZ9 AL139393.2-201ENST00000608721 2025 ntBASIC20.33■□□□□ 0.85
TRAV30A0A087WSZ9 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRAV30A0A087WSZ9 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRAV30A0A087WSZ9 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRAV30A0A087WSZ9 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
TRAV30A0A087WSZ9 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRAV30A0A087WSZ9 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV30A0A087WSZ9 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV30A0A087WSZ9 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV30A0A087WSZ9 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV30A0A087WSZ9 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.32■□□□□ 0.84
TRAV30A0A087WSZ9 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV30A0A087WSZ9 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.32■□□□□ 0.84
TRAV30A0A087WSZ9 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV30A0A087WSZ9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV30A0A087WSZ9 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV30A0A087WSZ9 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
TRAV30A0A087WSZ9 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV30A0A087WSZ9 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRAV30A0A087WSZ9 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV30A0A087WSZ9 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV30A0A087WSZ9 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV30A0A087WSZ9 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV30A0A087WSZ9 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.28■□□□□ 0.84
TRAV30A0A087WSZ9 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV30A0A087WSZ9 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV30A0A087WSZ9 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV30A0A087WSZ9 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV30A0A087WSZ9 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.27■□□□□ 0.84
TRAV30A0A087WSZ9 AC097358.2-201ENST00000607541 1159 ntBASIC20.27■□□□□ 0.84
TRAV30A0A087WSZ9 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV30A0A087WSZ9 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV30A0A087WSZ9 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV30A0A087WSZ9 AC142086.6-201ENST00000621154 1765 ntBASIC20.26■□□□□ 0.83
TRAV30A0A087WSZ9 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TRAV30A0A087WSZ9 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV30A0A087WSZ9 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV30A0A087WSZ9 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV30A0A087WSZ9 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV30A0A087WSZ9 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.24■□□□□ 0.83
TRAV30A0A087WSZ9 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV30A0A087WSZ9 CAHM-201ENST00000604200 896 ntBASIC20.23■□□□□ 0.83
TRAV30A0A087WSZ9 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TRAV30A0A087WSZ9 AC136428.2-201ENST00000563187 214 ntBASIC20.22■□□□□ 0.83
TRAV30A0A087WSZ9 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.22■□□□□ 0.83
TRAV30A0A087WSZ9 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.22■□□□□ 0.83
TRAV30A0A087WSZ9 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TRAV30A0A087WSZ9 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.21■□□□□ 0.83
TRAV30A0A087WSZ9 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.21■□□□□ 0.83
TRAV30A0A087WSZ9 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TRAV30A0A087WSZ9 AP004833.2-201ENST00000532228 1454 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms