Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC090044.1-201ENST00000423193 497 ntTSL 2 BASIC9.27□□□□□ -0.93
LMO3Q8TAP4 BLNK-204ENST00000427367 1284 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
LMO3Q8TAP4 TMEM127-203ENST00000435268 582 ntTSL 3 BASIC9.27□□□□□ -0.93
LMO3Q8TAP4 Z69666.1-201ENST00000445733 801 ntTSL 3 BASIC9.27□□□□□ -0.93
LMO3Q8TAP4 GRPEL2P3-201ENST00000448626 640 ntBASIC9.27□□□□□ -0.93
LMO3Q8TAP4 RNF7P1-201ENST00000478598 342 ntBASIC9.27□□□□□ -0.93
LMO3Q8TAP4 AC006153.1-201ENST00000480135 371 ntTSL 3 BASIC9.27□□□□□ -0.93
LMO3Q8TAP4 RN7SL280P-201ENST00000496490 288 ntBASIC9.27□□□□□ -0.93
LMO3Q8TAP4 AP003108.2-208ENST00000543044 883 ntTSL 3 BASIC9.27□□□□□ -0.93
LMO3Q8TAP4 LINC01572-202ENST00000563770 568 ntTSL 5 BASIC9.27□□□□□ -0.93
LMO3Q8TAP4 ULK4P3-202ENST00000565158 593 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
LMO3Q8TAP4 AC009630.2-202ENST00000578500 884 ntTSL 3 BASIC9.27□□□□□ -0.93
LMO3Q8TAP4 PRYP3-202ENST00000607210 444 ntBASIC9.27□□□□□ -0.93
LMO3Q8TAP4 STARD13-AS-247ENST00000610879 779 ntTSL 5 BASIC9.27□□□□□ -0.93
LMO3Q8TAP4 Metazoa_SRP.164-201ENST00000620748 331 ntBASIC9.27□□□□□ -0.93
LMO3Q8TAP4 AL121785.1-201ENST00000624745 708 ntBASIC9.27□□□□□ -0.93
LMO3Q8TAP4 THG1L-201ENST00000231198 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LMO3Q8TAP4 AKAP2-201ENST00000259318 3101 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
LMO3Q8TAP4 PSG8-201ENST00000306511 1441 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
LMO3Q8TAP4 DAZ4-203ENST00000382432 2405 ntTSL 5 BASIC9.27□□□□□ -0.93
LMO3Q8TAP4 DAZ2-205ENST00000382433 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
LMO3Q8TAP4 SEPSECS-202ENST00000382103 5496 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LMO3Q8TAP4 RBM5-201ENST00000347869 3188 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LMO3Q8TAP4 NCKAP1L-202ENST00000545638 3612 ntTSL 2 BASIC9.27□□□□□ -0.93
LMO3Q8TAP4 TLR1-202ENST00000502213 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LMO3Q8TAP4 WARS-204ENST00000392882 2938 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LMO3Q8TAP4 GOSR2-240ENST00000640621 3059 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
LMO3Q8TAP4 ZBTB37-202ENST00000367702 1337 ntTSL 5 BASIC9.27□□□□□ -0.93
LMO3Q8TAP4 FGG-203ENST00000404648 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LMO3Q8TAP4 ZNF221-201ENST00000251269 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LMO3Q8TAP4 LUCAT1-203ENST00000513626 2672 ntTSL 2 BASIC9.27□□□□□ -0.93
LMO3Q8TAP4 HNRNPDL-204ENST00000507721 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 ATP5G3-201ENST00000284727 5484 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 PACRG-203ENST00000366889 1503 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 AKAP2-202ENST00000374525 6866 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 SLC34A2-201ENST00000382051 4122 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 APOL3-202ENST00000361710 3563 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 EPPK1-202ENST00000615648 16002 ntAPPRIS P2 TSL 5 BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 FBXW7-204ENST00000393956 1735 ntTSL 2 BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 ERMAP-201ENST00000328249 3949 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 MAATS1-201ENST00000273390 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 MYH1-201ENST00000226207 6024 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 SH3YL1-202ENST00000402632 3151 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 IGLV6-57-201ENST00000390285 353 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 MT1X-201ENST00000394485 450 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 ISX-AS1-201ENST00000427881 202 ntTSL 3 BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 PAICSP5-201ENST00000430406 1217 ntBASIC9.26□□□□□ -0.93
LMO3Q8TAP4 AL450311.1-201ENST00000434931 576 ntTSL 4 BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 AC109588.1-202ENST00000515720 880 ntTSL 3 BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 AC008632.1-201ENST00000519400 753 ntTSL 3 BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 AC009927.2-201ENST00000520812 481 ntBASIC9.26□□□□□ -0.93
LMO3Q8TAP4 AP003354.1-201ENST00000523791 533 ntTSL 2 BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 PABPN1-208ENST00000557702 778 ntTSL 2 BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 TP53TG3HP-201ENST00000563487 346 ntBASIC9.26□□□□□ -0.93
LMO3Q8TAP4 RPL17-212ENST00000581373 584 ntTSL 2 BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 RN7SL279P-201ENST00000582185 284 ntBASIC9.26□□□□□ -0.93
LMO3Q8TAP4 PDLIM1P3-201ENST00000582370 599 ntBASIC9.26□□□□□ -0.93
LMO3Q8TAP4 AL080250.1-202ENST00000607221 915 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 ADAL-208ENST00000610420 974 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 TRBV10-3-201ENST00000611462 368 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 Metazoa_SRP.29-201ENST00000616220 280 ntBASIC9.26□□□□□ -0.93
LMO3Q8TAP4 KCNQ1OT1_2.1-201ENST00000619507 196 ntBASIC9.26□□□□□ -0.93
LMO3Q8TAP4 BTBD3-215ENST00000618918 4486 ntAPPRIS ALT1 TSL 4 BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 RDH11-201ENST00000381346 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 CPB1-208ENST00000491148 1773 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 TNPO3-205ENST00000627585 4514 ntTSL 2 BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 HIVEP3-201ENST00000372583 12193 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 ERCC6-208ENST00000515869 3439 ntTSL 2 BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 HKR1-202ENST00000392153 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 IMMT-201ENST00000254636 2613 ntTSL 5 BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 TBC1D5-219ENST00000446818 3124 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 UNC5C-201ENST00000453304 9875 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 MAN1A2-201ENST00000356554 8576 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 AC108058.1-201ENST00000457290 2044 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 VPS11-206ENST00000614944 3388 ntTSL 2 BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 LINC02204-201ENST00000630447 3206 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LMO3Q8TAP4 RSU1-203ENST00000377921 3919 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 C9orf72-206ENST00000619707 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 PTPRE-202ENST00000306042 4957 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 HNRNPK-201ENST00000351839 2652 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 GLDCP1-201ENST00000510885 2678 ntBASIC9.25□□□□□ -0.93
LMO3Q8TAP4 SMARCAL1-202ENST00000358207 3056 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 PIEZO2-210ENST00000580640 8334 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 PCSK1-201ENST00000311106 5086 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 RBP2-201ENST00000232217 694 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 IL37-201ENST00000263326 772 ntAPPRIS P4 TSL 1 (best) BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 GIMAP7-201ENST00000313543 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 LINC00272-201ENST00000367563 740 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 CRYGS-202ENST00000392499 1132 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 LINC00869-202ENST00000430442 1065 ntTSL 5 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 AC004448.4-203ENST00000456537 441 ntTSL 3 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 AC096751.2-201ENST00000507483 792 ntTSL 3 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 AC093835.1-201ENST00000508072 568 ntTSL 4 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 ZFAND1-214ENST00000521287 772 ntTSL 3 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 TAS2R38-201ENST00000547270 1143 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 PRR13-206ENST00000549135 755 ntAPPRIS ALT2 TSL 3 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 AC005632.1-201ENST00000550637 576 ntBASIC9.25□□□□□ -0.93
LMO3Q8TAP4 HNRNPC-227ENST00000556897 1252 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 AC012186.1-201ENST00000566702 398 ntBASIC9.25□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms