RNA–Protein interactions for RNA: ENST00000366889.6

PACRG-203, Transcript of parkin coregulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACRG, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-203ENST00000366889 AEBP2Q6ZN18 517 aaPredicted RBP23.48■■□□□ 1.35
PACRG-203ENST00000366889 CHIC1Q5VXU3 224 aa22.75■■□□□ 1.23
PACRG-203ENST00000366889 PHF23Q9BUL5 403 aaPredicted RBP20.02■□□□□ 0.79
PACRG-203ENST00000366889 SENP3Q9H4L4 574 aaPredicted RBP19.89■□□□□ 0.77
PACRG-203ENST00000366889 NISCHQ9Y2I1 1504 aa19.72■□□□□ 0.75
PACRG-203ENST00000366889 FOXD1Q16676 465 aa18.51■□□□□ 0.55
PACRG-203ENST00000366889 PLPPR3Q6T4P5 718 aa18.39■□□□□ 0.53
PACRG-203ENST00000366889 ABCC9O60706 1549 aa18.19■□□□□ 0.5
PACRG-203ENST00000366889 PPP6R1Q9UPN7 881 aa17.72■□□□□ 0.43
PACRG-203ENST00000366889 DNAJC5BQ9UF47 199 aa17.69■□□□□ 0.42
PACRG-203ENST00000366889 ADRA2BP18089 450 aa17.67■□□□□ 0.42
PACRG-203ENST00000366889 CCDC180Q9P1Z9 1646 aa17.48■□□□□ 0.39
PACRG-203ENST00000366889 PIAS4Q8N2W9 510 aaPredicted RBP17.41■□□□□ 0.38
PACRG-203ENST00000366889 MSH5O43196 834 aa17.09■□□□□ 0.33
PACRG-203ENST00000366889 RB1CC1Q8TDY2 1594 aa16.93■□□□□ 0.3
PACRG-203ENST00000366889 PABPN1Q86U42 306 aaKnown RBP eCLIP16.77■□□□□ 0.28
PACRG-203ENST00000366889 UNC13AQ9UPW8 1703 aa16.76■□□□□ 0.27
PACRG-203ENST00000366889 DNAJC5Q9H3Z4 198 aa16.65■□□□□ 0.26
PACRG-203ENST00000366889 NACADO15069 1562 aa16.62■□□□□ 0.25
PACRG-203ENST00000366889 BICRAQ9NZM4 1560 aa16.58■□□□□ 0.24
PACRG-203ENST00000366889 ZCCHC6Q5VYS8 1495 aaKnown RBP16.52■□□□□ 0.24
PACRG-203ENST00000366889 DCAF8L2P0C7V8 631 aa16.49■□□□□ 0.23
PACRG-203ENST00000366889 CC2D2AQ9P2K1 1620 aa16.41■□□□□ 0.22
PACRG-203ENST00000366889 CECR2Q9BXF3 1484 aa16.41■□□□□ 0.22
PACRG-203ENST00000366889 DCAF1Q9Y4B6 1507 aa16.34■□□□□ 0.21
PACRG-203ENST00000366889 MYO15BQ96JP2 1530 aa16.29■□□□□ 0.2
PACRG-203ENST00000366889 PPP4R3CPQ6ZMV5 832 aa16.2■□□□□ 0.18
PACRG-203ENST00000366889 EIF4G1Q04637 1599 aaKnown RBP16.18■□□□□ 0.18
PACRG-203ENST00000366889 SCAF1Q9H7N4 1312 aaKnown RBP16.11■□□□□ 0.17
PACRG-203ENST00000366889 SHROOM4Q9ULL8 1493 aa16.1■□□□□ 0.17
PACRG-203ENST00000366889 MAPK8IP2Q13387 824 aaPredicted RBP16.09■□□□□ 0.17
PACRG-203ENST00000366889 SCRIBQ14160 1630 aa16.01■□□□□ 0.15
PACRG-203ENST00000366889 CUX2O14529 1486 aa15.88■□□□□ 0.13
PACRG-203ENST00000366889 DMRT2Q9Y5R5 561 aa15.88■□□□□ 0.13
PACRG-203ENST00000366889 POTEDQ86YR6 584 aa15.86■□□□□ 0.13
PACRG-203ENST00000366889 CNKSR2Q8WXI2 1034 aa15.76■□□□□ 0.11
PACRG-203ENST00000366889 NCBP3Q53F19 620 aaKnown RBP15.69■□□□□ 0.1
PACRG-203ENST00000366889 ERCC6Q03468 1493 aa15.69■□□□□ 0.1
PACRG-203ENST00000366889 TRIM41Q8WV44 630 aa15.68■□□□□ 0.1
PACRG-203ENST00000366889 KCNA4P22459 653 aa15.68■□□□□ 0.1
PACRG-203ENST00000366889 NPM3O75607 178 aaKnown RBP15.52■□□□□ 0.07
PACRG-203ENST00000366889 RNF216Q9NWF9 866 aaPredicted RBP15.49■□□□□ 0.07
PACRG-203ENST00000366889 HOXD11P31277 338 aaPredicted RBP15.48■□□□□ 0.07
PACRG-203ENST00000366889 THOC2Q8NI27 1593 aaKnown RBP15.47■□□□□ 0.07
PACRG-203ENST00000366889 NESP48681 1621 aa15.46■□□□□ 0.07
PACRG-203ENST00000366889 NCAPD3P42695 1498 aa15.33■□□□□ 0.04
PACRG-203ENST00000366889 SMARCA2P51531 1590 aa15.32■□□□□ 0.04
PACRG-203ENST00000366889 KIF21AQ7Z4S6 1674 aa15.29■□□□□ 0.04
PACRG-203ENST00000366889 SMARCA4P51532 1647 aa15.28■□□□□ 0.04
PACRG-203ENST00000366889 BAZ1AQ9NRL2 1556 aaPredicted RBP15.25■□□□□ 0.03
PACRG-203ENST00000366889 MROH2BQ7Z745 1585 aa15.24■□□□□ 0.03
PACRG-203ENST00000366889 ATAD2BQ9ULI0 1458 aa15.23■□□□□ 0.03
PACRG-203ENST00000366889 RSF1Q96T23 1441 aaPredicted RBP15.22■□□□□ 0.03
PACRG-203ENST00000366889 SUPT5HO00267 1087 aaKnown RBP15.22■□□□□ 0.03
PACRG-203ENST00000366889 HMGXB3Q12766 1538 aa15.21■□□□□ 0.03
PACRG-203ENST00000366889 DCAF8L1A6NGE4 600 aa15.18■□□□□ 0.02
PACRG-203ENST00000366889 LAMC3Q9Y6N6 1575 aa15.14■□□□□ 0.01
PACRG-203ENST00000366889 PEG3Q9GZU2 1588 aa15.11■□□□□ 0.01
PACRG-203ENST00000366889 WIZO95785 1651 aa15.08■□□□□ 0.01
PACRG-203ENST00000366889 BAZ1BQ9UIG0 1483 aaKnown RBP15.05■□□□□ -0
PACRG-203ENST00000366889 RIMBP3CA6NJZ7 1639 aa15.04■□□□□ -0
PACRG-203ENST00000366889 RIMBP3BA6NNM3 1639 aa15.04■□□□□ -0
PACRG-203ENST00000366889 RIMBP3Q9UFD9 1639 aa15.04■□□□□ -0
PACRG-203ENST00000366889 WDR62O43379 1518 aa15.02■□□□□ -0
PACRG-203ENST00000366889 MRC2Q9UBG0 1479 aa15□□□□□ -0.01
PACRG-203ENST00000366889 PDS5BQ9NTI5 1447 aa15□□□□□ -0.01
PACRG-203ENST00000366889 OSCARQ8IYS5 282 aa14.95□□□□□ -0.02
PACRG-203ENST00000366889 TOP2AP11388 1531 aaKnown RBP14.92□□□□□ -0.02
PACRG-203ENST00000366889 ARHGEF11O15085 1522 aa14.87□□□□□ -0.03
PACRG-203ENST00000366889 SLC4A1APQ9BWU0 796 aaKnown RBP14.87□□□□□ -0.03
PACRG-203ENST00000366889 CADPSQ9ULU8 1353 aa14.82□□□□□ -0.04
PACRG-203ENST00000366889 CEP164Q9UPV0 1460 aa14.79□□□□□ -0.04
PACRG-203ENST00000366889 TRHP20396 242 aaPredicted RBP14.76□□□□□ -0.05
PACRG-203ENST00000366889 CCDC88BA6NC98 1476 aa14.75□□□□□ -0.05
PACRG-203ENST00000366889 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.74□□□□□ -0.05
PACRG-203ENST00000366889 FANCD2Q9BXW9 1451 aa14.72□□□□□ -0.05
PACRG-203ENST00000366889 CYB5RLQ6IPT4 315 aa14.71□□□□□ -0.06
PACRG-203ENST00000366889 URB2Q14146 1524 aaKnown RBP14.7□□□□□ -0.06
PACRG-203ENST00000366889 ARAP1Q96P48 1450 aa14.7□□□□□ -0.06
PACRG-203ENST00000366889 SLC4A2P04920 1241 aa14.7□□□□□ -0.06
PACRG-203ENST00000366889 RNF39Q9H2S5 420 aa14.66□□□□□ -0.06
PACRG-203ENST00000366889 ZNF608Q9ULD9 1512 aaPredicted RBP14.64□□□□□ -0.07
PACRG-203ENST00000366889 CFTRP13569 1480 aa14.64□□□□□ -0.07
PACRG-203ENST00000366889 CHD1O14646 1710 aa14.63□□□□□ -0.07
PACRG-203ENST00000366889 EIF4G3O43432 1585 aaKnown RBP14.55□□□□□ -0.08
PACRG-203ENST00000366889 PRDM2Q13029 1718 aa14.54□□□□□ -0.08
PACRG-203ENST00000366889 U3KPZ7 1027 aaPredicted RBP14.52□□□□□ -0.08
PACRG-203ENST00000366889 IFT140Q96RY7 1462 aa14.49□□□□□ -0.09
PACRG-203ENST00000366889 ZBTB22O15209 634 aa14.45□□□□□ -0.1
PACRG-203ENST00000366889 C1QBPQ07021 282 aaKnown RBP14.44□□□□□ -0.1
PACRG-203ENST00000366889 FOXD4L1Q9NU39 408 aa14.44□□□□□ -0.1
PACRG-203ENST00000366889 ILDR1Q86SU0 546 aaPredicted RBP14.4□□□□□ -0.1
PACRG-203ENST00000366889 TOPBP1Q92547 1522 aa14.39□□□□□ -0.11
PACRG-203ENST00000366889 AQRO60306 1485 aaKnown RBP eCLIP14.37□□□□□ -0.11
PACRG-203ENST00000366889 CLASP1Q7Z460 1538 aa14.36□□□□□ -0.11
PACRG-203ENST00000366889 CACNB1Q02641 598 aaPredicted RBP14.36□□□□□ -0.11
PACRG-203ENST00000366889 ABCC8Q09428 1581 aa14.36□□□□□ -0.11
PACRG-203ENST00000366889 TARBP1Q13395 1621 aaKnown RBP14.35□□□□□ -0.11
PACRG-203ENST00000366889 FBLN2P98095 1184 aa14.35□□□□□ -0.11
PACRG-203ENST00000366889 MYCNP04198 464 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms