Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC012409.5-201ENST00000624746 3424 ntBASIC8.12□□□□□ -1.11
P04436 CKAP2-201ENST00000258607 3375 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
P04436 METTL7A-201ENST00000332160 3390 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
P04436 SFR1-202ENST00000369729 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
P04436 SMIM2-AS1-203ENST00000618753 2101 ntTSL 4 BASIC8.12□□□□□ -1.11
P04436 CD3EAP-201ENST00000309424 3286 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
P04436 CES5A-203ENST00000518005 2092 ntTSL 2 BASIC8.12□□□□□ -1.11
P04436 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
P04436 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
P04436 INTS6-215ENST00000490542 2307 ntTSL 5 BASIC8.12□□□□□ -1.11
P04436 MAPK10-375ENST00000641989 2331 ntBASIC8.12□□□□□ -1.11
P04436 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
P04436 EYA4-203ENST00000367895 5699 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
P04436 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
P04436 SPATA31E3P-201ENST00000613133 4214 ntBASIC8.11□□□□□ -1.11
P04436 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
P04436 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC8.11□□□□□ -1.11
P04436 TNFAIP3-210ENST00000620204 3817 ntTSL 5 BASIC8.11□□□□□ -1.11
P04436 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
P04436 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
P04436 WDR20-201ENST00000299135 2198 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
P04436 NEDD4L-203ENST00000357895 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
P04436 PSG8-204ENST00000406636 1610 ntTSL 2 BASIC8.11□□□□□ -1.11
P04436 CREB1-201ENST00000353267 7588 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P04436 BRD2-203ENST00000395287 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
P04436 MSRB3-212ENST00000614640 4270 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
P04436 NEUROD6-201ENST00000297142 2131 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P04436 FLJ22447-202ENST00000556569 1312 ntTSL 2 BASIC8.11□□□□□ -1.11
P04436 SCMH1-208ENST00000397171 3186 ntTSL 5 BASIC8.11□□□□□ -1.11
P04436 MTRNR2L1-201ENST00000540040 1553 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
P04436 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P04436 LINC01278-205ENST00000609401 2886 ntTSL 2 BASIC8.11□□□□□ -1.11
P04436 GABRR1-207ENST00000621627 2857 ntTSL 5 BASIC8.11□□□□□ -1.11
P04436 TBC1D3P1-DHX40P1-201ENST00000587125 1841 ntTSL 2 BASIC8.11□□□□□ -1.11
P04436 NAALAD2-210ENST00000534061 3600 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P04436 PRR11-201ENST00000262293 2332 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P04436 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
P04436 SP1-201ENST00000327443 2846 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P04436 LINC00943-203ENST00000535544 2815 ntTSL 2 BASIC8.11□□□□□ -1.11
P04436 IRF1-201ENST00000245414 3579 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P04436 KRBOX1-201ENST00000383748 674 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P04436 EGFLAM-205ENST00000397210 1299 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
P04436 AC003087.1-201ENST00000412828 499 ntTSL 3 BASIC8.11□□□□□ -1.11
P04436 IYD-207ENST00000425615 684 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
P04436 AL035420.1-201ENST00000430679 458 ntTSL 5 BASIC8.11□□□□□ -1.11
P04436 DSCR10-201ENST00000432141 860 ntTSL 3 BASIC8.11□□□□□ -1.11
P04436 UBE2Q1-AS1-201ENST00000441613 432 ntTSL 3 BASIC8.11□□□□□ -1.11
P04436 TMEM97P1-201ENST00000452969 451 ntBASIC8.11□□□□□ -1.11
P04436 SOX2-OT-202ENST00000461063 566 ntTSL 3 BASIC8.11□□□□□ -1.11
P04436 ZBTB20-AS5-201ENST00000465249 622 ntTSL 3 BASIC8.11□□□□□ -1.11
P04436 AC080188.1-201ENST00000491923 567 ntBASIC8.11□□□□□ -1.11
P04436 RN7SL653P-201ENST00000494134 293 ntBASIC8.11□□□□□ -1.11
P04436 PLA2G12AP1-201ENST00000497678 568 ntBASIC8.11□□□□□ -1.11
P04436 ATM-209ENST00000526567 560 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
P04436 AP003122.1-201ENST00000527402 755 ntBASIC8.11□□□□□ -1.11
P04436 FLT1-205ENST00000543394 1275 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
P04436 AC089998.4-201ENST00000552532 459 ntTSL 3 BASIC8.11□□□□□ -1.11
P04436 AC013565.2-201ENST00000564874 310 ntBASIC8.11□□□□□ -1.11
P04436 CD300LF-208ENST00000581500 720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
P04436 NAPA-AS1-202ENST00000594367 630 ntTSL 2 BASIC8.11□□□□□ -1.11
P04436 AC008622.1-201ENST00000597106 284 ntBASIC8.11□□□□□ -1.11
P04436 Metazoa_SRP.165-201ENST00000615681 260 ntBASIC8.11□□□□□ -1.11
P04436 GZMB-209ENST00000616551 559 ntTSL 2 BASIC8.11□□□□□ -1.11
P04436 FLT1-208ENST00000617835 434 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
P04436 Metazoa_SRP.132-201ENST00000619251 285 ntBASIC8.11□□□□□ -1.11
P04436 AC234791.1-201ENST00000620830 1203 ntBASIC8.11□□□□□ -1.11
P04436 ALG13-226ENST00000622986 582 ntTSL 2 BASIC8.11□□□□□ -1.11
P04436 CU633967.1-202ENST00000623449 560 ntTSL 5 BASIC8.11□□□□□ -1.11
P04436 CU638689.5-201ENST00000623892 1032 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
P04436 AC007326.3-201ENST00000636418 176 ntBASIC8.11□□□□□ -1.11
P04436 KLHL12-202ENST00000367259 2257 ntTSL 2 BASIC8.11□□□□□ -1.11
P04436 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC8.11□□□□□ -1.11
P04436 C2CD3-202ENST00000334126 7960 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
P04436 OTOA-202ENST00000388956 3466 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
P04436 AC134508.1-201ENST00000570082 2977 ntBASIC8.11□□□□□ -1.11
P04436 OSBPL3-202ENST00000396429 2707 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
P04436 EXD2-202ENST00000409014 3404 ntTSL 2 BASIC8.11□□□□□ -1.11
P04436 HTR2A-201ENST00000378688 4835 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P04436 NLRP1-204ENST00000354411 4332 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
P04436 ACVR1-202ENST00000409283 2879 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
P04436 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
P04436 ZNF763-201ENST00000343949 2621 ntAPPRIS P2 TSL 2 BASIC8.11□□□□□ -1.11
P04436 TCF4-226ENST00000565018 2357 ntTSL 5 BASIC8.11□□□□□ -1.11
P04436 MASP1-202ENST00000296280 4015 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
P04436 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P04436 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC8.11□□□□□ -1.11
P04436 AMMECR1L-201ENST00000272647 4658 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
P04436 PREPL-202ENST00000378511 2315 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
P04436 MRNIP-204ENST00000518219 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
P04436 TNIK-201ENST00000284483 4059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
P04436 VPS45-201ENST00000369128 2224 ntTSL 2 BASIC8.1□□□□□ -1.11
P04436 AC024610.2-204ENST00000637478 2867 ntTSL 5 BASIC8.1□□□□□ -1.11
P04436 PECAM1-203ENST00000563924 6831 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
P04436 NANOGP1-202ENST00000607111 1982 ntTSL 5 BASIC8.1□□□□□ -1.11
P04436 ASXL2-202ENST00000404843 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
P04436 OGDH-206ENST00000447398 3474 ntTSL 5 BASIC8.1□□□□□ -1.11
P04436 CTNNA2-209ENST00000466387 4349 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
P04436 SPIN3-211ENST00000638712 4286 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
P04436 NOS1-202ENST00000338101 4462 ntTSL 5 BASIC8.1□□□□□ -1.11
P04436 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms