RNA–Protein interactions for RNA: ENST00000245414.8

IRF1-201, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-201ENST00000245414 NISCHQ9Y2I1 1504 aa17.41■□□□□ 0.38
IRF1-201ENST00000245414 PELP1Q8IZL8 1130 aaKnown RBP16.94■□□□□ 0.3
IRF1-201ENST00000245414 HRCP23327 699 aa16.53■□□□□ 0.24
IRF1-201ENST00000245414 MYT1Q01538 1121 aa16.48■□□□□ 0.23
IRF1-201ENST00000245414 PPARGC1BQ86YN6 1023 aaKnown RBP16.29■□□□□ 0.2
IRF1-201ENST00000245414 PCGF6Q9BYE7 350 aa16.1■□□□□ 0.17
IRF1-201ENST00000245414 SCAF1Q9H7N4 1312 aaKnown RBP16■□□□□ 0.15
IRF1-201ENST00000245414 DCAF8L2P0C7V8 631 aa15.79■□□□□ 0.12
IRF1-201ENST00000245414 SUPT5HO00267 1087 aaKnown RBP15.55■□□□□ 0.08
IRF1-201ENST00000245414 TTBK1Q5TCY1 1321 aaPredicted RBP15.55■□□□□ 0.08
IRF1-201ENST00000245414 SHROOM4Q9ULL8 1493 aa15.49■□□□□ 0.07
IRF1-201ENST00000245414 GTF3C3Q9Y5Q9 886 aa15.46■□□□□ 0.07
IRF1-201ENST00000245414 ACIN1Q9UKV3 1341 aaKnown RBP15.45■□□□□ 0.06
IRF1-201ENST00000245414 NEUROD1Q13562 356 aa15.39■□□□□ 0.05
IRF1-201ENST00000245414 ZEB1P37275 1124 aaPredicted RBP15.37■□□□□ 0.05
IRF1-201ENST00000245414 BCL11AQ9H165 835 aa15.36■□□□□ 0.05
IRF1-201ENST00000245414 CENPBP07199 599 aaPredicted RBP15.34■□□□□ 0.05
IRF1-201ENST00000245414 TRIM26Q12899 539 aaPredicted RBP15.26■□□□□ 0.03
IRF1-201ENST00000245414 MYO15BQ96JP2 1530 aa15.23■□□□□ 0.03
IRF1-201ENST00000245414 PRKCSHP14314 528 aaPredicted RBP15.17■□□□□ 0.02
IRF1-201ENST00000245414 FAM9AQ8IZU1 332 aaPredicted RBP15.17■□□□□ 0.02
IRF1-201ENST00000245414 CHIC1Q5VXU3 224 aa15.14■□□□□ 0.01
IRF1-201ENST00000245414 LOC105371045A0A1W2PR82 267 aa15.02□□□□□ -0.01
IRF1-201ENST00000245414 DCAF1Q9Y4B6 1507 aa15.01□□□□□ -0.01
IRF1-201ENST00000245414 CCDC180Q9P1Z9 1646 aa15□□□□□ -0.01
IRF1-201ENST00000245414 YTHDC1Q96MU7 727 aaKnown RBP14.99□□□□□ -0.01
IRF1-201ENST00000245414 DIEXFQ68CQ4 756 aaKnown RBP14.94□□□□□ -0.02
IRF1-201ENST00000245414 ANP32EQ9BTT0 268 aa14.93□□□□□ -0.02
IRF1-201ENST00000245414 ERICH6Q7L0X2 663 aa14.92□□□□□ -0.02
IRF1-201ENST00000245414 CSRNP3Q8WYN3 585 aa14.82□□□□□ -0.04
IRF1-201ENST00000245414 CCER1Q8TC90 406 aaPredicted RBP14.75□□□□□ -0.05
IRF1-201ENST00000245414 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.69□□□□□ -0.06
IRF1-201ENST00000245414 ZCCHC6Q5VYS8 1495 aaKnown RBP14.67□□□□□ -0.06
IRF1-201ENST00000245414 EHMT2Q96KQ7 1210 aa14.64□□□□□ -0.07
IRF1-201ENST00000245414 TSHZ2Q9NRE2 1034 aa14.55□□□□□ -0.08
IRF1-201ENST00000245414 APLP2Q06481 763 aa14.53□□□□□ -0.08
IRF1-201ENST00000245414 SUPT16HQ9Y5B9 1047 aaKnown RBP14.46□□□□□ -0.09
IRF1-201ENST00000245414 MIER1Q8N108 512 aa14.45□□□□□ -0.1
IRF1-201ENST00000245414 ZNF316A6NFI3 1004 aaPredicted RBP14.44□□□□□ -0.1
IRF1-201ENST00000245414 TRIM41Q8WV44 630 aa14.42□□□□□ -0.1
IRF1-201ENST00000245414 ANO8Q9HCE9 1232 aaPredicted RBP14.37□□□□□ -0.11
IRF1-201ENST00000245414 BCANQ96GW7 911 aa14.34□□□□□ -0.11
IRF1-201ENST00000245414 CLSPNQ9HAW4 1339 aa14.32□□□□□ -0.12
IRF1-201ENST00000245414 RBM19Q9Y4C8 960 aaKnown RBP14.21□□□□□ -0.14
IRF1-201ENST00000245414 CCDC136Q96JN2 1154 aa14.19□□□□□ -0.14
IRF1-201ENST00000245414 DEKP35659 375 aaKnown RBP14.14□□□□□ -0.15
IRF1-201ENST00000245414 AEBP2Q6ZN18 517 aaPredicted RBP14.14□□□□□ -0.15
IRF1-201ENST00000245414 SALL2Q9Y467 1007 aaPredicted RBP14.14□□□□□ -0.15
IRF1-201ENST00000245414 FKBP8Q14318 412 aa14.1□□□□□ -0.15
IRF1-201ENST00000245414 NEFLP07196 543 aa14.07□□□□□ -0.16
IRF1-201ENST00000245414 ABCC9O60706 1549 aa14.07□□□□□ -0.16
IRF1-201ENST00000245414 MYT1LQ9UL68 1186 aa14.07□□□□□ -0.16
IRF1-201ENST00000245414 MSH5O43196 834 aa14.04□□□□□ -0.16
IRF1-201ENST00000245414 ITGAEP38570 1179 aa14.04□□□□□ -0.16
IRF1-201ENST00000245414 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.04□□□□□ -0.16
IRF1-201ENST00000245414 UBE2Q2Q8WVN8 375 aa14.02□□□□□ -0.17
IRF1-201ENST00000245414 RTN4Q9NQC3 1192 aaKnown RBP13.99□□□□□ -0.17
IRF1-201ENST00000245414 EIF5BO60841 1220 aaKnown RBP13.98□□□□□ -0.17
IRF1-201ENST00000245414 NBR1Q14596 966 aa13.95□□□□□ -0.18
IRF1-201ENST00000245414 ERICH6BQ5W0A0 696 aa13.93□□□□□ -0.18
IRF1-201ENST00000245414 SCRIBQ14160 1630 aa13.93□□□□□ -0.18
IRF1-201ENST00000245414 NACADO15069 1562 aa13.91□□□□□ -0.18
IRF1-201ENST00000245414 CDK11AQ9UQ88 783 aaPredicted RBP13.87□□□□□ -0.19
IRF1-201ENST00000245414 HNRNPUL2Q1KMD3 747 aaKnown RBP13.84□□□□□ -0.19
IRF1-201ENST00000245414 RTL5Q5HYW3 569 aaPredicted RBP13.84□□□□□ -0.19
IRF1-201ENST00000245414 FANCIQ9NVI1 1328 aa13.84□□□□□ -0.19
IRF1-201ENST00000245414 IL27Q8NEV9 243 aa13.83□□□□□ -0.2
IRF1-201ENST00000245414 PKNOX2Q96KN3 472 aa13.82□□□□□ -0.2
IRF1-201ENST00000245414 RANGAP1P46060 587 aaPredicted RBP13.8□□□□□ -0.2
IRF1-201ENST00000245414 PABPN1Q86U42 306 aaKnown RBP eCLIP13.78□□□□□ -0.2
IRF1-201ENST00000245414 SLC24A1O60721 1099 aa13.77□□□□□ -0.21
IRF1-201ENST00000245414 KCNH8Q96L42 1107 aa13.76□□□□□ -0.21
IRF1-201ENST00000245414 RB1CC1Q8TDY2 1594 aa13.74□□□□□ -0.21
IRF1-201ENST00000245414 NOP58Q9Y2X3 529 aaKnown RBP13.7□□□□□ -0.22
IRF1-201ENST00000245414 PLEKHG5O94827 1062 aa13.68□□□□□ -0.22
IRF1-201ENST00000245414 TRIM52Q96A61 297 aa13.68□□□□□ -0.22
IRF1-201ENST00000245414 IRX6P78412 446 aaPredicted RBP13.67□□□□□ -0.22
IRF1-201ENST00000245414 PODXL2Q9NZ53 605 aa13.65□□□□□ -0.23
IRF1-201ENST00000245414 RSF1Q96T23 1441 aaPredicted RBP13.63□□□□□ -0.23
IRF1-201ENST00000245414 PAK3O75914 559 aaPredicted RBP13.58□□□□□ -0.23
IRF1-201ENST00000245414 CECR2Q9BXF3 1484 aa13.58□□□□□ -0.24
IRF1-201ENST00000245414 UNC13AQ9UPW8 1703 aa13.58□□□□□ -0.24
IRF1-201ENST00000245414 UBTFP17480 764 aaKnown RBP13.58□□□□□ -0.24
IRF1-201ENST00000245414 GLIPR1L2Q4G1C9 344 aa13.58□□□□□ -0.24
IRF1-201ENST00000245414 TIMELESSQ9UNS1 1208 aa13.57□□□□□ -0.24
IRF1-201ENST00000245414 ZBTB47Q9UFB7 747 aaPredicted RBP13.53□□□□□ -0.24
IRF1-201ENST00000245414 ANP32AP39687 249 aaKnown RBP13.52□□□□□ -0.24
IRF1-201ENST00000245414 DDX10Q13206 875 aaKnown RBP13.51□□□□□ -0.25
IRF1-201ENST00000245414 MROH2BQ7Z745 1585 aa13.51□□□□□ -0.25
IRF1-201ENST00000245414 VSIG10Q8N0Z9 540 aa13.5□□□□□ -0.25
IRF1-201ENST00000245414 DAXXQ9UER7 740 aaPredicted RBP13.48□□□□□ -0.25
IRF1-201ENST00000245414 NEFMP07197 916 aa13.44□□□□□ -0.26
IRF1-201ENST00000245414 BRPF3Q9ULD4 1205 aa13.44□□□□□ -0.26
IRF1-201ENST00000245414 B4GALNT3Q6L9W6 998 aa13.42□□□□□ -0.26
IRF1-201ENST00000245414 ZMYND15Q9H091 742 aa13.42□□□□□ -0.26
IRF1-201ENST00000245414 WIZO95785 1651 aa13.42□□□□□ -0.26
IRF1-201ENST00000245414 LAS1LQ9Y4W2 734 aaKnown RBP13.42□□□□□ -0.26
IRF1-201ENST00000245414 CEP162Q5TB80 1403 aa13.42□□□□□ -0.26
IRF1-201ENST00000245414 BICRAQ9NZM4 1560 aa13.41□□□□□ -0.26
IRF1-201ENST00000245414 ANP32CO43423 234 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms