Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AL034372.1-201ENST00000407586 754 ntBASIC9.43□□□□□ -0.9
MTHFRP42898 AC034228.1-201ENST00000424244 923 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MTHFRP42898 AC034238.2-201ENST00000445660 567 ntTSL 4 BASIC9.43□□□□□ -0.9
MTHFRP42898 LINC00445-202ENST00000456848 643 ntTSL 3 BASIC9.43□□□□□ -0.9
MTHFRP42898 IGHVIII-13-1-201ENST00000517613 291 ntBASIC9.43□□□□□ -0.9
MTHFRP42898 IGLVI-56-201ENST00000521342 342 ntBASIC9.43□□□□□ -0.9
MTHFRP42898 AC083841.1-201ENST00000523657 670 ntTSL 2 BASIC9.43□□□□□ -0.9
MTHFRP42898 AP006437.1-202ENST00000530327 933 ntBASIC9.43□□□□□ -0.9
MTHFRP42898 NPM1P50-201ENST00000532878 867 ntBASIC9.43□□□□□ -0.9
MTHFRP42898 AC025252.2-201ENST00000537470 502 ntBASIC9.43□□□□□ -0.9
MTHFRP42898 AC063947.2-201ENST00000547000 1256 ntBASIC9.43□□□□□ -0.9
MTHFRP42898 HMGN2P46-207ENST00000568669 388 ntTSL 3 BASIC9.43□□□□□ -0.9
MTHFRP42898 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MTHFRP42898 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC9.43□□□□□ -0.9
MTHFRP42898 FAM74A6-203ENST00000615956 481 ntBASIC9.43□□□□□ -0.9
MTHFRP42898 AC025279.3-201ENST00000622398 104 ntBASIC9.43□□□□□ -0.9
MTHFRP42898 SMG7-216ENST00000638826 219 ntTSL 2 BASIC9.43□□□□□ -0.9
MTHFRP42898 CLDN16-201ENST00000264734 3273 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MTHFRP42898 ISX-202ENST00000404699 3094 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MTHFRP42898 AL355916.1-202ENST00000508827 5103 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MTHFRP42898 ANKS1B-213ENST00000549025 2973 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MTHFRP42898 TCF7-202ENST00000378560 2929 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MTHFRP42898 CLIP1-214ENST00000540539 2592 ntTSL 2 BASIC9.43□□□□□ -0.9
MTHFRP42898 LINC02181-201ENST00000430050 4083 ntTSL 2 BASIC9.43□□□□□ -0.9
MTHFRP42898 SLC11A2-212ENST00000547688 2401 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
MTHFRP42898 EIF5A2-201ENST00000295822 5593 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
MTHFRP42898 LINC01630-201ENST00000435144 5489 ntTSL 5 BASIC9.43□□□□□ -0.9
MTHFRP42898 ZNF85-202ENST00000328178 2296 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
MTHFRP42898 PTPRA-204ENST00000380393 3636 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MTHFRP42898 STEAP2-206ENST00000394632 2072 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
MTHFRP42898 SVOP-205ENST00000610966 6813 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MTHFRP42898 SYT2-202ENST00000367268 7598 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MTHFRP42898 MYOM1-203ENST00000400569 4927 ntTSL 5 BASIC9.42□□□□□ -0.9
MTHFRP42898 ZSCAN5B-201ENST00000358992 1626 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
MTHFRP42898 SPATA31D4-201ENST00000419782 4787 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MTHFRP42898 CAB39L-212ENST00000610540 3692 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
MTHFRP42898 TRPM3-211ENST00000396280 4671 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
MTHFRP42898 TTTY25P-201ENST00000558356 1505 ntBASIC9.42□□□□□ -0.9
MTHFRP42898 STARD4-212ENST00000512160 3500 ntTSL 2 BASIC9.42□□□□□ -0.9
MTHFRP42898 PPP1R3B-201ENST00000310455 5548 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MTHFRP42898 MELK-201ENST00000298048 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MTHFRP42898 LINC01260-201ENST00000415889 1416 ntTSL 5 BASIC9.42□□□□□ -0.9
MTHFRP42898 MYH2-206ENST00000622564 2379 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
MTHFRP42898 DNAH11-212ENST00000620169 13670 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
MTHFRP42898 AP002490.1-201ENST00000502284 4233 ntTSL 2 BASIC9.42□□□□□ -0.9
MTHFRP42898 ZNF620-201ENST00000314529 3291 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MTHFRP42898 SERPINB6-202ENST00000380520 3265 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MTHFRP42898 SUN1-210ENST00000425407 3868 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
MTHFRP42898 RNA5SP74-201ENST00000363538 109 ntBASIC9.42□□□□□ -0.9
MTHFRP42898 U3.38-201ENST00000408534 216 ntBASIC9.42□□□□□ -0.9
MTHFRP42898 RN7SKP168-201ENST00000410910 300 ntBASIC9.42□□□□□ -0.9
MTHFRP42898 AL392003.2-201ENST00000451015 679 ntBASIC9.42□□□□□ -0.9
MTHFRP42898 OSBPL10-AS1-207ENST00000455961 411 ntTSL 2 BASIC9.42□□□□□ -0.9
MTHFRP42898 AC020595.1-201ENST00000456446 533 ntTSL 3 BASIC9.42□□□□□ -0.9
MTHFRP42898 AC108114.1-201ENST00000477321 437 ntBASIC9.42□□□□□ -0.9
MTHFRP42898 RN7SL659P-201ENST00000483093 299 ntBASIC9.42□□□□□ -0.9
MTHFRP42898 AF131215.1-201ENST00000488887 520 ntBASIC9.42□□□□□ -0.9
MTHFRP42898 OR7E121P-201ENST00000494533 1022 ntBASIC9.42□□□□□ -0.9
MTHFRP42898 AP002469.1-201ENST00000526011 1043 ntBASIC9.42□□□□□ -0.9
MTHFRP42898 SLC5A4P1-201ENST00000532944 612 ntBASIC9.42□□□□□ -0.9
MTHFRP42898 PRR13P2-201ENST00000533804 406 ntBASIC9.42□□□□□ -0.9
MTHFRP42898 AC119751.8-201ENST00000597032 156 ntBASIC9.42□□□□□ -0.9
MTHFRP42898 LINC00837-203ENST00000608061 555 ntTSL 4 BASIC9.42□□□□□ -0.9
MTHFRP42898 AL731556.2-201ENST00000615610 770 ntBASIC9.42□□□□□ -0.9
MTHFRP42898 BSNDP3-201ENST00000617487 364 ntBASIC9.42□□□□□ -0.9
MTHFRP42898 IGHV3-54-201ENST00000622166 353 ntBASIC9.42□□□□□ -0.9
MTHFRP42898 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC9.42□□□□□ -0.9
MTHFRP42898 AC022784.8-201ENST00000623764 559 ntBASIC9.42□□□□□ -0.9
MTHFRP42898 AC093495.1-212ENST00000630173 1162 ntTSL 5 BASIC9.42□□□□□ -0.9
MTHFRP42898 AC108477.1-201ENST00000636764 526 ntTSL 4 BASIC9.42□□□□□ -0.9
MTHFRP42898 PPP1R12A-213ENST00000550107 2925 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
MTHFRP42898 RAD21-201ENST00000297338 3749 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MTHFRP42898 ZBTB20-203ENST00000462705 3740 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MTHFRP42898 MPP7-203ENST00000375732 5063 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
MTHFRP42898 GABRA1-203ENST00000428797 4285 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MTHFRP42898 GLRA1-201ENST00000274576 1803 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
MTHFRP42898 EIF4BP5-201ENST00000567338 1795 ntBASIC9.42□□□□□ -0.9
MTHFRP42898 AL137025.1-201ENST00000436932 2378 ntTSL 2 BASIC9.42□□□□□ -0.9
MTHFRP42898 NFATC2IP-203ENST00000564978 2350 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
MTHFRP42898 ARID4A-201ENST00000348476 5562 ntTSL 5 BASIC9.42□□□□□ -0.9
MTHFRP42898 DPY19L4-201ENST00000414645 6197 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
MTHFRP42898 ACAD10-220ENST00000549590 2888 ntTSL 5 BASIC9.42□□□□□ -0.9
MTHFRP42898 EXO1-202ENST00000366548 3473 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
MTHFRP42898 AGPAT4-201ENST00000320285 7865 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
MTHFRP42898 TCF7L2-204ENST00000352065 1553 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
MTHFRP42898 LINC00608-202ENST00000432733 2818 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
MTHFRP42898 SCIMP-202ENST00000571800 2155 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
MTHFRP42898 PPP2R5C-201ENST00000328724 4045 ntTSL 2 BASIC9.41□□□□□ -0.9
MTHFRP42898 NEUROD6-201ENST00000297142 2131 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
MTHFRP42898 LRRC8D-202ENST00000394593 3345 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
MTHFRP42898 DHX29-201ENST00000251636 4502 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
MTHFRP42898 TTC23-214ENST00000558663 2068 ntAPPRIS P2 TSL 2 BASIC9.41□□□□□ -0.9
MTHFRP42898 AP005060.1-201ENST00000623868 3174 ntBASIC9.41□□□□□ -0.9
MTHFRP42898 C1orf198-202ENST00000427697 3666 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
MTHFRP42898 CYFIP2-209ENST00000521420 6370 ntTSL 2 BASIC9.41□□□□□ -0.9
MTHFRP42898 PTGR2-203ENST00000553813 1351 ntTSL 5 BASIC9.41□□□□□ -0.9
MTHFRP42898 RIPOR2-202ENST00000378023 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
MTHFRP42898 LINC01858-201ENST00000564534 1838 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
MTHFRP42898 CNGA2-201ENST00000329903 2834 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
MTHFRP42898 SPRR3-201ENST00000295367 878 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms