RNA–Protein interactions for RNA: ENST00000378560.8

TCF7-202, Transcript of transcription factor 7, humanhuman

TSL 1 (best) BASIC

Gene TCF7, Length 2,929 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF7-202ENST00000378560 NISCHQ9Y2I1 1504 aa18.84■□□□□ 0.61
TCF7-202ENST00000378560 SLC24A1O60721 1099 aa17.4■□□□□ 0.38
TCF7-202ENST00000378560 EHMT2Q96KQ7 1210 aa16.12■□□□□ 0.17
TCF7-202ENST00000378560 CCDC180Q9P1Z9 1646 aa16.1■□□□□ 0.17
TCF7-202ENST00000378560 SHROOM4Q9ULL8 1493 aa16.07■□□□□ 0.16
TCF7-202ENST00000378560 DCAF8L2P0C7V8 631 aa15.97■□□□□ 0.15
TCF7-202ENST00000378560 SUPT5HO00267 1087 aaKnown RBP15.88■□□□□ 0.13
TCF7-202ENST00000378560 ZCCHC6Q5VYS8 1495 aaKnown RBP15.84■□□□□ 0.13
TCF7-202ENST00000378560 PLPPR3Q6T4P5 718 aa15.84■□□□□ 0.13
TCF7-202ENST00000378560 CHIC1Q5VXU3 224 aa15.81■□□□□ 0.12
TCF7-202ENST00000378560 DAXXQ9UER7 740 aaPredicted RBP15.77■□□□□ 0.11
TCF7-202ENST00000378560 RTN4Q9NQC3 1192 aaKnown RBP15.65■□□□□ 0.1
TCF7-202ENST00000378560 MYO15BQ96JP2 1530 aa15.55■□□□□ 0.08
TCF7-202ENST00000378560 HRCP23327 699 aa15.45■□□□□ 0.06
TCF7-202ENST00000378560 ABCC9O60706 1549 aa15.45■□□□□ 0.06
TCF7-202ENST00000378560 NCBP3Q53F19 620 aaKnown RBP15.39■□□□□ 0.05
TCF7-202ENST00000378560 DCAF1Q9Y4B6 1507 aa15.36■□□□□ 0.05
TCF7-202ENST00000378560 PRKCSHP14314 528 aaPredicted RBP15.32■□□□□ 0.04
TCF7-202ENST00000378560 PCGF6Q9BYE7 350 aa15.29■□□□□ 0.04
TCF7-202ENST00000378560 SCRIBQ14160 1630 aa15.18■□□□□ 0.02
TCF7-202ENST00000378560 APLP2Q06481 763 aa15.17■□□□□ 0.02
TCF7-202ENST00000378560 MYT1Q01538 1121 aa15.16■□□□□ 0.02
TCF7-202ENST00000378560 TTBK1Q5TCY1 1321 aaPredicted RBP15.13■□□□□ 0.01
TCF7-202ENST00000378560 LOC105371045A0A1W2PR82 267 aa15.13■□□□□ 0.01
TCF7-202ENST00000378560 PPARGC1BQ86YN6 1023 aaKnown RBP15.1■□□□□ 0.01
TCF7-202ENST00000378560 PELP1Q8IZL8 1130 aaKnown RBP15.04■□□□□ -0
TCF7-202ENST00000378560 NACADO15069 1562 aa15.02□□□□□ -0.01
TCF7-202ENST00000378560 AMER1Q5JTC6 1135 aaPredicted RBP15□□□□□ -0.01
TCF7-202ENST00000378560 KCNA4P22459 653 aa14.99□□□□□ -0.01
TCF7-202ENST00000378560 ERICH6Q7L0X2 663 aa14.97□□□□□ -0.01
TCF7-202ENST00000378560 TRIM26Q12899 539 aaPredicted RBP14.95□□□□□ -0.02
TCF7-202ENST00000378560 RB1CC1Q8TDY2 1594 aa14.88□□□□□ -0.03
TCF7-202ENST00000378560 RSF1Q96T23 1441 aaPredicted RBP14.88□□□□□ -0.03
TCF7-202ENST00000378560 TIMELESSQ9UNS1 1208 aa14.86□□□□□ -0.03
TCF7-202ENST00000378560 CSRNP3Q8WYN3 585 aa14.82□□□□□ -0.04
TCF7-202ENST00000378560 CECR2Q9BXF3 1484 aa14.8□□□□□ -0.04
TCF7-202ENST00000378560 AEBP2Q6ZN18 517 aaPredicted RBP14.77□□□□□ -0.05
TCF7-202ENST00000378560 TRIM41Q8WV44 630 aa14.77□□□□□ -0.05
TCF7-202ENST00000378560 PABPN1Q86U42 306 aaKnown RBP eCLIP14.76□□□□□ -0.05
TCF7-202ENST00000378560 ARXQ96QS3 562 aa14.75□□□□□ -0.05
TCF7-202ENST00000378560 ZEB1P37275 1124 aaPredicted RBP14.69□□□□□ -0.06
TCF7-202ENST00000378560 MROH2BQ7Z745 1585 aa14.67□□□□□ -0.06
TCF7-202ENST00000378560 UNC13AQ9UPW8 1703 aa14.67□□□□□ -0.06
TCF7-202ENST00000378560 FAM9AQ8IZU1 332 aaPredicted RBP14.65□□□□□ -0.06
TCF7-202ENST00000378560 TULP1O00294 542 aaPredicted RBP14.61□□□□□ -0.07
TCF7-202ENST00000378560 WIZO95785 1651 aa14.57□□□□□ -0.08
TCF7-202ENST00000378560 BICRAQ9NZM4 1560 aa14.51□□□□□ -0.09
TCF7-202ENST00000378560 BAZ1AQ9NRL2 1556 aaPredicted RBP14.48□□□□□ -0.09
TCF7-202ENST00000378560 PHF23Q9BUL5 403 aaPredicted RBP14.47□□□□□ -0.09
TCF7-202ENST00000378560 TAOK2Q9UL54 1235 aa14.47□□□□□ -0.09
TCF7-202ENST00000378560 KLHL34Q8N239 644 aa14.45□□□□□ -0.1
TCF7-202ENST00000378560 RANGAP1P46060 587 aaPredicted RBP14.45□□□□□ -0.1
TCF7-202ENST00000378560 SMARCA4P51532 1647 aa14.42□□□□□ -0.1
TCF7-202ENST00000378560 SCAF1Q9H7N4 1312 aaKnown RBP14.37□□□□□ -0.11
TCF7-202ENST00000378560 EIF5BO60841 1220 aaKnown RBP14.37□□□□□ -0.11
TCF7-202ENST00000378560 EIF4G1Q04637 1599 aaKnown RBP14.34□□□□□ -0.11
TCF7-202ENST00000378560 HOMEZQ8IX15 550 aa14.32□□□□□ -0.12
TCF7-202ENST00000378560 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.31□□□□□ -0.12
TCF7-202ENST00000378560 TPRNQ4KMQ1 711 aa14.29□□□□□ -0.12
TCF7-202ENST00000378560 TOP2AP11388 1531 aaKnown RBP14.27□□□□□ -0.12
TCF7-202ENST00000378560 CCDC88BA6NC98 1476 aa14.27□□□□□ -0.13
TCF7-202ENST00000378560 CCER1Q8TC90 406 aaPredicted RBP14.26□□□□□ -0.13
TCF7-202ENST00000378560 PODXL2Q9NZ53 605 aa14.25□□□□□ -0.13
TCF7-202ENST00000378560 WRNQ14191 1432 aaPredicted RBP eCLIP14.22□□□□□ -0.13
TCF7-202ENST00000378560 SMARCA2P51531 1590 aa14.21□□□□□ -0.14
TCF7-202ENST00000378560 ABCC8Q09428 1581 aa14.19□□□□□ -0.14
TCF7-202ENST00000378560 ATAD2BQ9ULI0 1458 aa14.17□□□□□ -0.14
TCF7-202ENST00000378560 CEP162Q5TB80 1403 aa14.16□□□□□ -0.14
TCF7-202ENST00000378560 ACIN1Q9UKV3 1341 aaKnown RBP14.16□□□□□ -0.14
TCF7-202ENST00000378560 BCANQ96GW7 911 aa14.14□□□□□ -0.15
TCF7-202ENST00000378560 SOGA1O94964 1423 aa14.14□□□□□ -0.15
TCF7-202ENST00000378560 TNIKQ9UKE5 1360 aa14.14□□□□□ -0.15
TCF7-202ENST00000378560 NEUROD1Q13562 356 aa14.13□□□□□ -0.15
TCF7-202ENST00000378560 BAZ1BQ9UIG0 1483 aaKnown RBP14.12□□□□□ -0.15
TCF7-202ENST00000378560 DIEXFQ68CQ4 756 aaKnown RBP14.11□□□□□ -0.15
TCF7-202ENST00000378560 PEG3Q9GZU2 1588 aa14.1□□□□□ -0.15
TCF7-202ENST00000378560 PLEKHG5O94827 1062 aa14.08□□□□□ -0.15
TCF7-202ENST00000378560 EEA1Q15075 1411 aa14.07□□□□□ -0.16
TCF7-202ENST00000378560 RUSC2Q8N2Y8 1516 aa14.06□□□□□ -0.16
TCF7-202ENST00000378560 UBTFP17480 764 aaKnown RBP14.02□□□□□ -0.16
TCF7-202ENST00000378560 CENPBP07199 599 aaPredicted RBP14□□□□□ -0.17
TCF7-202ENST00000378560 GTF3C3Q9Y5Q9 886 aa14□□□□□ -0.17
TCF7-202ENST00000378560 GOLGA3Q08378 1498 aa13.98□□□□□ -0.17
TCF7-202ENST00000378560 ZNF316A6NFI3 1004 aaPredicted RBP13.96□□□□□ -0.17
TCF7-202ENST00000378560 NCAPD3P42695 1498 aa13.93□□□□□ -0.18
TCF7-202ENST00000378560 PLCB2Q00722 1185 aa13.92□□□□□ -0.18
TCF7-202ENST00000378560 SLC4A1APQ9BWU0 796 aaKnown RBP13.89□□□□□ -0.19
TCF7-202ENST00000378560 CEP164Q9UPV0 1460 aa13.88□□□□□ -0.19
TCF7-202ENST00000378560 NPM2Q86SE8 214 aaKnown RBP13.87□□□□□ -0.19
TCF7-202ENST00000378560 HMGXB3Q12766 1538 aa13.86□□□□□ -0.19
TCF7-202ENST00000378560 HAP1P54257 671 aaPredicted RBP13.86□□□□□ -0.19
TCF7-202ENST00000378560 HNRNPUL2Q1KMD3 747 aaKnown RBP13.86□□□□□ -0.19
TCF7-202ENST00000378560 SYNJ1O43426 1573 aa13.85□□□□□ -0.19
TCF7-202ENST00000378560 CLIP1P30622 1438 aa13.85□□□□□ -0.19
TCF7-202ENST00000378560 KIF21BO75037 1637 aa13.85□□□□□ -0.19
TCF7-202ENST00000378560 CC2D2AQ9P2K1 1620 aa13.84□□□□□ -0.19
TCF7-202ENST00000378560 VPS8Q8N3P4 1428 aa13.81□□□□□ -0.2
TCF7-202ENST00000378560 MIER1Q8N108 512 aa13.8□□□□□ -0.2
TCF7-202ENST00000378560 RAPGEF2Q9Y4G8 1499 aa13.78□□□□□ -0.2
TCF7-202ENST00000378560 C14orf37Q86TY3 774 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms