Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC15.36■□□□□ 0.05
HLA-DRB4X5D2U9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.36■□□□□ 0.05
HLA-DRB4X5D2U9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC15.36■□□□□ 0.05
HLA-DRB4X5D2U9 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC15.36■□□□□ 0.05
HLA-DRB4X5D2U9 FGF8-207ENST00000618991 856 ntTSL 3 BASIC15.36■□□□□ 0.05
HLA-DRB4X5D2U9 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRB4X5D2U9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRB4X5D2U9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.36■□□□□ 0.05
HLA-DRB4X5D2U9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRB4X5D2U9 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC15.36■□□□□ 0.05
HLA-DRB4X5D2U9 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DRB4X5D2U9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
HLA-DRB4X5D2U9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC15.35■□□□□ 0.05
HLA-DRB4X5D2U9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRB4X5D2U9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRB4X5D2U9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRB4X5D2U9 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRB4X5D2U9 AC121338.2-201ENST00000622535 1744 ntBASIC15.35■□□□□ 0.05
HLA-DRB4X5D2U9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
HLA-DRB4X5D2U9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC15.35■□□□□ 0.05
HLA-DRB4X5D2U9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRB4X5D2U9 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRB4X5D2U9 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRB4X5D2U9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRB4X5D2U9 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HLA-DRB4X5D2U9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC15.35■□□□□ 0.05
HLA-DRB4X5D2U9 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC15.35■□□□□ 0.05
HLA-DRB4X5D2U9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC15.35■□□□□ 0.05
HLA-DRB4X5D2U9 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
HLA-DRB4X5D2U9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRB4X5D2U9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC15.35■□□□□ 0.05
HLA-DRB4X5D2U9 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRB4X5D2U9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
HLA-DRB4X5D2U9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.35■□□□□ 0.05
HLA-DRB4X5D2U9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DRB4X5D2U9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DRB4X5D2U9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HLA-DRB4X5D2U9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRB4X5D2U9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
HLA-DRB4X5D2U9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRB4X5D2U9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DRB4X5D2U9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRB4X5D2U9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRB4X5D2U9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRB4X5D2U9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRB4X5D2U9 HSCB-202ENST00000398941 955 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DRB4X5D2U9 MIR935-201ENST00000401179 91 ntBASIC15.34■□□□□ 0.05
HLA-DRB4X5D2U9 AC016769.1-201ENST00000409132 1010 ntBASIC15.34■□□□□ 0.05
HLA-DRB4X5D2U9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRB4X5D2U9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRB4X5D2U9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DRB4X5D2U9 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HLA-DRB4X5D2U9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC15.34■□□□□ 0.05
HLA-DRB4X5D2U9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRB4X5D2U9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRB4X5D2U9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
HLA-DRB4X5D2U9 AL391422.3-201ENST00000603791 2761 ntBASIC15.34■□□□□ 0.05
HLA-DRB4X5D2U9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRB4X5D2U9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
HLA-DRB4X5D2U9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC15.34■□□□□ 0.05
HLA-DRB4X5D2U9 RBM17P2-201ENST00000616397 1405 ntBASIC15.34■□□□□ 0.05
HLA-DRB4X5D2U9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DRB4X5D2U9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
HLA-DRB4X5D2U9 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
HLA-DRB4X5D2U9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.05
HLA-DRB4X5D2U9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
HLA-DRB4X5D2U9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC15.33■□□□□ 0.05
HLA-DRB4X5D2U9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HLA-DRB4X5D2U9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
HLA-DRB4X5D2U9 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HLA-DRB4X5D2U9 AC011484.1-201ENST00000377652 1995 ntBASIC15.33■□□□□ 0.05
HLA-DRB4X5D2U9 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.33■□□□□ 0.04
HLA-DRB4X5D2U9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
HLA-DRB4X5D2U9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HLA-DRB4X5D2U9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DRB4X5D2U9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HLA-DRB4X5D2U9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DRB4X5D2U9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DRB4X5D2U9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC15.33■□□□□ 0.04
HLA-DRB4X5D2U9 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC15.33■□□□□ 0.04
HLA-DRB4X5D2U9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC15.33■□□□□ 0.04
HLA-DRB4X5D2U9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC15.33■□□□□ 0.04
HLA-DRB4X5D2U9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
HLA-DRB4X5D2U9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC15.33■□□□□ 0.04
HLA-DRB4X5D2U9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DRB4X5D2U9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DRB4X5D2U9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HLA-DRB4X5D2U9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DRB4X5D2U9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DRB4X5D2U9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DRB4X5D2U9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DRB4X5D2U9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DRB4X5D2U9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
HLA-DRB4X5D2U9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DRB4X5D2U9 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DRB4X5D2U9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DRB4X5D2U9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC15.33■□□□□ 0.04
HLA-DRB4X5D2U9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DRB4X5D2U9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms