Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 TK2-204ENST00000525974 1178 ntTSL 2 BASIC22.63■■□□□ 1.21
SCN10AQ9Y5Y9 SNX21-213ENST00000614929 587 ntTSL 5 BASIC22.63■■□□□ 1.21
SCN10AQ9Y5Y9 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SCN10AQ9Y5Y9 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SCN10AQ9Y5Y9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SCN10AQ9Y5Y9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SCN10AQ9Y5Y9 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SCN10AQ9Y5Y9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
SCN10AQ9Y5Y9 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SCN10AQ9Y5Y9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
SCN10AQ9Y5Y9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SCN10AQ9Y5Y9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SCN10AQ9Y5Y9 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SCN10AQ9Y5Y9 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC22.62■■□□□ 1.21
SCN10AQ9Y5Y9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC22.62■■□□□ 1.21
SCN10AQ9Y5Y9 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SCN10AQ9Y5Y9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.62■■□□□ 1.21
SCN10AQ9Y5Y9 AC113410.3-201ENST00000623366 203 ntBASIC22.62■■□□□ 1.21
SCN10AQ9Y5Y9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SCN10AQ9Y5Y9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
SCN10AQ9Y5Y9 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
SCN10AQ9Y5Y9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
SCN10AQ9Y5Y9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.62■■□□□ 1.21
SCN10AQ9Y5Y9 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SCN10AQ9Y5Y9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SCN10AQ9Y5Y9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.61■■□□□ 1.21
SCN10AQ9Y5Y9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SCN10AQ9Y5Y9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
SCN10AQ9Y5Y9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
SCN10AQ9Y5Y9 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
SCN10AQ9Y5Y9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.61■■□□□ 1.21
SCN10AQ9Y5Y9 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
SCN10AQ9Y5Y9 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC22.61■■□□□ 1.21
SCN10AQ9Y5Y9 AC006557.6-201ENST00000623071 864 ntBASIC22.61■■□□□ 1.21
SCN10AQ9Y5Y9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SCN10AQ9Y5Y9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SCN10AQ9Y5Y9 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SCN10AQ9Y5Y9 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
SCN10AQ9Y5Y9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SCN10AQ9Y5Y9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SCN10AQ9Y5Y9 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SCN10AQ9Y5Y9 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SCN10AQ9Y5Y9 AC211429.1-201ENST00000415277 523 ntBASIC22.61■■□□□ 1.21
SCN10AQ9Y5Y9 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC22.61■■□□□ 1.21
SCN10AQ9Y5Y9 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SCN10AQ9Y5Y9 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.61■■□□□ 1.21
SCN10AQ9Y5Y9 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC22.61■■□□□ 1.21
SCN10AQ9Y5Y9 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
SCN10AQ9Y5Y9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SCN10AQ9Y5Y9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SCN10AQ9Y5Y9 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SCN10AQ9Y5Y9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.61■■□□□ 1.21
SCN10AQ9Y5Y9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SCN10AQ9Y5Y9 AL135905.2-201ENST00000584934 1404 ntBASIC22.6■■□□□ 1.21
SCN10AQ9Y5Y9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.6■■□□□ 1.21
SCN10AQ9Y5Y9 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC22.6■■□□□ 1.21
SCN10AQ9Y5Y9 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.6■■□□□ 1.21
SCN10AQ9Y5Y9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SCN10AQ9Y5Y9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.6■■□□□ 1.21
SCN10AQ9Y5Y9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SCN10AQ9Y5Y9 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC22.6■■□□□ 1.21
SCN10AQ9Y5Y9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
SCN10AQ9Y5Y9 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
SCN10AQ9Y5Y9 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SCN10AQ9Y5Y9 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC22.6■■□□□ 1.21
SCN10AQ9Y5Y9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SCN10AQ9Y5Y9 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
SCN10AQ9Y5Y9 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SCN10AQ9Y5Y9 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
SCN10AQ9Y5Y9 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.59■■□□□ 1.21
SCN10AQ9Y5Y9 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC22.59■■□□□ 1.21
SCN10AQ9Y5Y9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.59■■□□□ 1.21
SCN10AQ9Y5Y9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SCN10AQ9Y5Y9 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SCN10AQ9Y5Y9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
SCN10AQ9Y5Y9 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SCN10AQ9Y5Y9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC22.59■■□□□ 1.21
SCN10AQ9Y5Y9 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC22.59■■□□□ 1.21
SCN10AQ9Y5Y9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SCN10AQ9Y5Y9 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC22.59■■□□□ 1.21
SCN10AQ9Y5Y9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
SCN10AQ9Y5Y9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.58■■□□□ 1.21
SCN10AQ9Y5Y9 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
SCN10AQ9Y5Y9 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SCN10AQ9Y5Y9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SCN10AQ9Y5Y9 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SCN10AQ9Y5Y9 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
SCN10AQ9Y5Y9 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
SCN10AQ9Y5Y9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
SCN10AQ9Y5Y9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SCN10AQ9Y5Y9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SCN10AQ9Y5Y9 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SCN10AQ9Y5Y9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.58■■□□□ 1.2
SCN10AQ9Y5Y9 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SCN10AQ9Y5Y9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.58■■□□□ 1.2
SCN10AQ9Y5Y9 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
SCN10AQ9Y5Y9 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC22.58■■□□□ 1.2
SCN10AQ9Y5Y9 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
SCN10AQ9Y5Y9 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SCN10AQ9Y5Y9 PENK-204ENST00000518770 863 ntTSL 2 BASIC22.58■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms