Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LSM2Q9Y333 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LSM2Q9Y333 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LSM2Q9Y333 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.18■□□□□ 0.5
LSM2Q9Y333 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.18■□□□□ 0.5
LSM2Q9Y333 AC011298.3-201ENST00000615796 283 ntBASIC18.18■□□□□ 0.5
LSM2Q9Y333 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LSM2Q9Y333 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LSM2Q9Y333 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LSM2Q9Y333 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.18■□□□□ 0.5
LSM2Q9Y333 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.18■□□□□ 0.5
LSM2Q9Y333 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LSM2Q9Y333 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LSM2Q9Y333 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.18■□□□□ 0.5
LSM2Q9Y333 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.18■□□□□ 0.5
LSM2Q9Y333 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LSM2Q9Y333 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.18■□□□□ 0.5
LSM2Q9Y333 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.17■□□□□ 0.5
LSM2Q9Y333 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LSM2Q9Y333 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSM2Q9Y333 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LSM2Q9Y333 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LSM2Q9Y333 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LSM2Q9Y333 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSM2Q9Y333 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSM2Q9Y333 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LSM2Q9Y333 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.17■□□□□ 0.5
LSM2Q9Y333 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSM2Q9Y333 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.17■□□□□ 0.5
LSM2Q9Y333 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSM2Q9Y333 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSM2Q9Y333 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LSM2Q9Y333 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSM2Q9Y333 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LSM2Q9Y333 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSM2Q9Y333 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSM2Q9Y333 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSM2Q9Y333 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.17■□□□□ 0.5
LSM2Q9Y333 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.17■□□□□ 0.5
LSM2Q9Y333 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LSM2Q9Y333 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
LSM2Q9Y333 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM2Q9Y333 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM2Q9Y333 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.16■□□□□ 0.5
LSM2Q9Y333 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.16■□□□□ 0.5
LSM2Q9Y333 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.16■□□□□ 0.5
LSM2Q9Y333 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
LSM2Q9Y333 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.16■□□□□ 0.5
LSM2Q9Y333 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM2Q9Y333 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM2Q9Y333 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LSM2Q9Y333 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM2Q9Y333 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM2Q9Y333 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LSM2Q9Y333 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM2Q9Y333 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.16■□□□□ 0.5
LSM2Q9Y333 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSM2Q9Y333 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LSM2Q9Y333 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LSM2Q9Y333 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.16■□□□□ 0.5
LSM2Q9Y333 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM2Q9Y333 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM2Q9Y333 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.15■□□□□ 0.5
LSM2Q9Y333 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM2Q9Y333 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.15■□□□□ 0.5
LSM2Q9Y333 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM2Q9Y333 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM2Q9Y333 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LSM2Q9Y333 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.15■□□□□ 0.5
LSM2Q9Y333 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.15■□□□□ 0.5
LSM2Q9Y333 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.15■□□□□ 0.5
LSM2Q9Y333 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.15■□□□□ 0.5
LSM2Q9Y333 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM2Q9Y333 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM2Q9Y333 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LSM2Q9Y333 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.15■□□□□ 0.5
LSM2Q9Y333 TMEM179-206ENST00000616017 1645 ntBASIC18.15■□□□□ 0.5
LSM2Q9Y333 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LSM2Q9Y333 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LSM2Q9Y333 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LSM2Q9Y333 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LSM2Q9Y333 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.15■□□□□ 0.5
LSM2Q9Y333 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
LSM2Q9Y333 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
LSM2Q9Y333 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
LSM2Q9Y333 AP004607.4-201ENST00000530158 1459 ntBASIC18.14■□□□□ 0.5
LSM2Q9Y333 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LSM2Q9Y333 AC093484.2-201ENST00000580996 2166 ntBASIC18.14■□□□□ 0.49
LSM2Q9Y333 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSM2Q9Y333 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSM2Q9Y333 AC061975.6-201ENST00000579045 1553 ntBASIC18.14■□□□□ 0.49
LSM2Q9Y333 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSM2Q9Y333 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.14■□□□□ 0.49
LSM2Q9Y333 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
LSM2Q9Y333 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.14■□□□□ 0.49
LSM2Q9Y333 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.14■□□□□ 0.49
LSM2Q9Y333 AC005224.4-201ENST00000583262 1652 ntBASIC18.14■□□□□ 0.49
LSM2Q9Y333 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
LSM2Q9Y333 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSM2Q9Y333 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms