Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COMMD3Q9UBI1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COMMD3Q9UBI1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
COMMD3Q9UBI1 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COMMD3Q9UBI1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COMMD3Q9UBI1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
COMMD3Q9UBI1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COMMD3Q9UBI1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COMMD3Q9UBI1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.98■□□□□ 0.47
COMMD3Q9UBI1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
COMMD3Q9UBI1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COMMD3Q9UBI1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.97■□□□□ 0.47
COMMD3Q9UBI1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
COMMD3Q9UBI1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COMMD3Q9UBI1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
COMMD3Q9UBI1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COMMD3Q9UBI1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COMMD3Q9UBI1 ABHD17AP5-201ENST00000580133 923 ntBASIC17.97■□□□□ 0.47
COMMD3Q9UBI1 AL117332.1-201ENST00000622628 974 ntBASIC17.97■□□□□ 0.47
COMMD3Q9UBI1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
COMMD3Q9UBI1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
COMMD3Q9UBI1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.97■□□□□ 0.47
COMMD3Q9UBI1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COMMD3Q9UBI1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.97■□□□□ 0.47
COMMD3Q9UBI1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
COMMD3Q9UBI1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COMMD3Q9UBI1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COMMD3Q9UBI1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
COMMD3Q9UBI1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
COMMD3Q9UBI1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
COMMD3Q9UBI1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COMMD3Q9UBI1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
COMMD3Q9UBI1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
COMMD3Q9UBI1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COMMD3Q9UBI1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
COMMD3Q9UBI1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.96■□□□□ 0.47
COMMD3Q9UBI1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COMMD3Q9UBI1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
COMMD3Q9UBI1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.96■□□□□ 0.47
COMMD3Q9UBI1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
COMMD3Q9UBI1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COMMD3Q9UBI1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
COMMD3Q9UBI1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COMMD3Q9UBI1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
COMMD3Q9UBI1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
COMMD3Q9UBI1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COMMD3Q9UBI1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COMMD3Q9UBI1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.96■□□□□ 0.47
COMMD3Q9UBI1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COMMD3Q9UBI1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COMMD3Q9UBI1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.96■□□□□ 0.46
COMMD3Q9UBI1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
COMMD3Q9UBI1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD3Q9UBI1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
COMMD3Q9UBI1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD3Q9UBI1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD3Q9UBI1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
COMMD3Q9UBI1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.95■□□□□ 0.46
COMMD3Q9UBI1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
COMMD3Q9UBI1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.95■□□□□ 0.46
COMMD3Q9UBI1 OR2I1P-207ENST00000453522 948 ntBASIC17.95■□□□□ 0.46
COMMD3Q9UBI1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.95■□□□□ 0.46
COMMD3Q9UBI1 HSD17B1P1-201ENST00000590052 955 ntBASIC17.95■□□□□ 0.46
COMMD3Q9UBI1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.95■□□□□ 0.46
COMMD3Q9UBI1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD3Q9UBI1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD3Q9UBI1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
COMMD3Q9UBI1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
COMMD3Q9UBI1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD3Q9UBI1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD3Q9UBI1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
COMMD3Q9UBI1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD3Q9UBI1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.95■□□□□ 0.46
COMMD3Q9UBI1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD3Q9UBI1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD3Q9UBI1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD3Q9UBI1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.95■□□□□ 0.46
COMMD3Q9UBI1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COMMD3Q9UBI1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD3Q9UBI1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD3Q9UBI1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD3Q9UBI1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD3Q9UBI1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.94■□□□□ 0.46
COMMD3Q9UBI1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
COMMD3Q9UBI1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD3Q9UBI1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD3Q9UBI1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD3Q9UBI1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.94■□□□□ 0.46
COMMD3Q9UBI1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD3Q9UBI1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.94■□□□□ 0.46
COMMD3Q9UBI1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD3Q9UBI1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD3Q9UBI1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD3Q9UBI1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD3Q9UBI1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
COMMD3Q9UBI1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD3Q9UBI1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD3Q9UBI1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.94■□□□□ 0.46
COMMD3Q9UBI1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD3Q9UBI1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms