Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3AQ9NNX9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.11■□□□□ 0.65
VCX3AQ9NNX9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3AQ9NNX9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3AQ9NNX9 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3AQ9NNX9 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
VCX3AQ9NNX9 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3AQ9NNX9 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3AQ9NNX9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3AQ9NNX9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3AQ9NNX9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3AQ9NNX9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3AQ9NNX9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3AQ9NNX9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3AQ9NNX9 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.1■□□□□ 0.65
VCX3AQ9NNX9 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
VCX3AQ9NNX9 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
VCX3AQ9NNX9 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VCX3AQ9NNX9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
VCX3AQ9NNX9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
VCX3AQ9NNX9 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.1■□□□□ 0.65
VCX3AQ9NNX9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VCX3AQ9NNX9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VCX3AQ9NNX9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
VCX3AQ9NNX9 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VCX3AQ9NNX9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.1■□□□□ 0.65
VCX3AQ9NNX9 AC079089.2-201ENST00000531211 1277 ntBASIC19.1■□□□□ 0.65
VCX3AQ9NNX9 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VCX3AQ9NNX9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VCX3AQ9NNX9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.1■□□□□ 0.65
VCX3AQ9NNX9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
VCX3AQ9NNX9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.1■□□□□ 0.65
VCX3AQ9NNX9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.1■□□□□ 0.65
VCX3AQ9NNX9 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VCX3AQ9NNX9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VCX3AQ9NNX9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 AC120024.1-201ENST00000562672 995 ntBASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
VCX3AQ9NNX9 AC093503.3-201ENST00000624917 2352 ntBASIC19.08■□□□□ 0.65
VCX3AQ9NNX9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.65
VCX3AQ9NNX9 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.08■□□□□ 0.65
VCX3AQ9NNX9 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
VCX3AQ9NNX9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
VCX3AQ9NNX9 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
VCX3AQ9NNX9 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
VCX3AQ9NNX9 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VCX3AQ9NNX9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.08■□□□□ 0.64
VCX3AQ9NNX9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
VCX3AQ9NNX9 PLK5-205ENST00000642079 1969 ntBASIC19.08■□□□□ 0.64
VCX3AQ9NNX9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VCX3AQ9NNX9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
VCX3AQ9NNX9 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VCX3AQ9NNX9 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VCX3AQ9NNX9 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
VCX3AQ9NNX9 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VCX3AQ9NNX9 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
VCX3AQ9NNX9 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
VCX3AQ9NNX9 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCX3AQ9NNX9 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VCX3AQ9NNX9 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCX3AQ9NNX9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCX3AQ9NNX9 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
VCX3AQ9NNX9 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCX3AQ9NNX9 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCX3AQ9NNX9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.07■□□□□ 0.64
VCX3AQ9NNX9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.07■□□□□ 0.64
VCX3AQ9NNX9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCX3AQ9NNX9 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
VCX3AQ9NNX9 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCX3AQ9NNX9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.07■□□□□ 0.64
VCX3AQ9NNX9 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VCX3AQ9NNX9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VCX3AQ9NNX9 AL049812.1-201ENST00000432563 2267 ntBASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms