Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
NELFAQ9H3P2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NELFAQ9H3P2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NELFAQ9H3P2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NELFAQ9H3P2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
NELFAQ9H3P2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
NELFAQ9H3P2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
NELFAQ9H3P2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NELFAQ9H3P2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NELFAQ9H3P2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NELFAQ9H3P2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NELFAQ9H3P2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
NELFAQ9H3P2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NELFAQ9H3P2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NELFAQ9H3P2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.2■□□□□ 0.5
NELFAQ9H3P2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
NELFAQ9H3P2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.2■□□□□ 0.5
NELFAQ9H3P2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NELFAQ9H3P2 CROCCP5-201ENST00000436658 830 ntBASIC18.2■□□□□ 0.5
NELFAQ9H3P2 AC026185.1-201ENST00000445748 174 ntBASIC18.2■□□□□ 0.5
NELFAQ9H3P2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.2■□□□□ 0.5
NELFAQ9H3P2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.2■□□□□ 0.5
NELFAQ9H3P2 AC090192.1-201ENST00000517740 490 ntBASIC18.2■□□□□ 0.5
NELFAQ9H3P2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.2■□□□□ 0.5
NELFAQ9H3P2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.2■□□□□ 0.5
NELFAQ9H3P2 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.2■□□□□ 0.5
NELFAQ9H3P2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.2■□□□□ 0.5
NELFAQ9H3P2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
NELFAQ9H3P2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
NELFAQ9H3P2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.2■□□□□ 0.5
NELFAQ9H3P2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NELFAQ9H3P2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.2■□□□□ 0.5
NELFAQ9H3P2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NELFAQ9H3P2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NELFAQ9H3P2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NELFAQ9H3P2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
NELFAQ9H3P2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NELFAQ9H3P2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NELFAQ9H3P2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NELFAQ9H3P2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NELFAQ9H3P2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NELFAQ9H3P2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
NELFAQ9H3P2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NELFAQ9H3P2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
NELFAQ9H3P2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NELFAQ9H3P2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NELFAQ9H3P2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NELFAQ9H3P2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.19■□□□□ 0.5
NELFAQ9H3P2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NELFAQ9H3P2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NELFAQ9H3P2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.19■□□□□ 0.5
NELFAQ9H3P2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
NELFAQ9H3P2 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.19■□□□□ 0.5
NELFAQ9H3P2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.19■□□□□ 0.5
NELFAQ9H3P2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NELFAQ9H3P2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.19■□□□□ 0.5
NELFAQ9H3P2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
NELFAQ9H3P2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.18■□□□□ 0.5
NELFAQ9H3P2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NELFAQ9H3P2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NELFAQ9H3P2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NELFAQ9H3P2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NELFAQ9H3P2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NELFAQ9H3P2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NELFAQ9H3P2 AC068338.2-201ENST00000563278 1430 ntBASIC18.18■□□□□ 0.5
NELFAQ9H3P2 AC116050.2-201ENST00000612102 1779 ntBASIC18.18■□□□□ 0.5
NELFAQ9H3P2 AC007322.1-201ENST00000426983 750 ntBASIC18.18■□□□□ 0.5
NELFAQ9H3P2 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.18■□□□□ 0.5
NELFAQ9H3P2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.18■□□□□ 0.5
NELFAQ9H3P2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.18■□□□□ 0.5
NELFAQ9H3P2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
NELFAQ9H3P2 AL050303.2-201ENST00000619798 666 ntBASIC18.18■□□□□ 0.5
NELFAQ9H3P2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.17■□□□□ 0.5
NELFAQ9H3P2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
NELFAQ9H3P2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NELFAQ9H3P2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NELFAQ9H3P2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NELFAQ9H3P2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NELFAQ9H3P2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NELFAQ9H3P2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.17■□□□□ 0.5
NELFAQ9H3P2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NELFAQ9H3P2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
NELFAQ9H3P2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.17■□□□□ 0.5
NELFAQ9H3P2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.17■□□□□ 0.5
NELFAQ9H3P2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.17■□□□□ 0.5
NELFAQ9H3P2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.17■□□□□ 0.5
NELFAQ9H3P2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.17■□□□□ 0.5
NELFAQ9H3P2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NELFAQ9H3P2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.17■□□□□ 0.5
NELFAQ9H3P2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.17■□□□□ 0.5
NELFAQ9H3P2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NELFAQ9H3P2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.17■□□□□ 0.5
NELFAQ9H3P2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NELFAQ9H3P2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NELFAQ9H3P2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NELFAQ9H3P2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
NELFAQ9H3P2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NELFAQ9H3P2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NELFAQ9H3P2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.16■□□□□ 0.5
NELFAQ9H3P2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms