Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC22.34■■□□□ 1.17
KCNF1Q9H3M0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC22.34■■□□□ 1.17
KCNF1Q9H3M0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.34■■□□□ 1.17
KCNF1Q9H3M0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC22.34■■□□□ 1.17
KCNF1Q9H3M0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.34■■□□□ 1.17
KCNF1Q9H3M0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
KCNF1Q9H3M0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
KCNF1Q9H3M0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
KCNF1Q9H3M0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC22.34■■□□□ 1.17
KCNF1Q9H3M0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
KCNF1Q9H3M0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
KCNF1Q9H3M0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
KCNF1Q9H3M0 TREX1-205ENST00000625293 1783 ntBASIC22.33■■□□□ 1.17
KCNF1Q9H3M0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.17
KCNF1Q9H3M0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
KCNF1Q9H3M0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC22.33■■□□□ 1.17
KCNF1Q9H3M0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
KCNF1Q9H3M0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.33■■□□□ 1.17
KCNF1Q9H3M0 SMUG1P1-201ENST00000590640 811 ntBASIC22.33■■□□□ 1.17
KCNF1Q9H3M0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.33■■□□□ 1.17
KCNF1Q9H3M0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
KCNF1Q9H3M0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
KCNF1Q9H3M0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.33■■□□□ 1.16
KCNF1Q9H3M0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
KCNF1Q9H3M0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
KCNF1Q9H3M0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.33■■□□□ 1.16
KCNF1Q9H3M0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
KCNF1Q9H3M0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
KCNF1Q9H3M0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
KCNF1Q9H3M0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
KCNF1Q9H3M0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
KCNF1Q9H3M0 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.33■■□□□ 1.16
KCNF1Q9H3M0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KCNF1Q9H3M0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KCNF1Q9H3M0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC22.32■■□□□ 1.16
KCNF1Q9H3M0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KCNF1Q9H3M0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KCNF1Q9H3M0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KCNF1Q9H3M0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KCNF1Q9H3M0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
KCNF1Q9H3M0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
KCNF1Q9H3M0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KCNF1Q9H3M0 AP005435.1-201ENST00000529293 1178 ntBASIC22.32■■□□□ 1.16
KCNF1Q9H3M0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
KCNF1Q9H3M0 MIR6724-1-201ENST00000616420 92 ntBASIC22.32■■□□□ 1.16
KCNF1Q9H3M0 MIR6724-2-201ENST00000616483 92 ntBASIC22.32■■□□□ 1.16
KCNF1Q9H3M0 MIR6724-4-201ENST00000617390 92 ntBASIC22.32■■□□□ 1.16
KCNF1Q9H3M0 MIR6724-3-201ENST00000622482 92 ntBASIC22.32■■□□□ 1.16
KCNF1Q9H3M0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.32■■□□□ 1.16
KCNF1Q9H3M0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC22.32■■□□□ 1.16
KCNF1Q9H3M0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC22.32■■□□□ 1.16
KCNF1Q9H3M0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC22.32■■□□□ 1.16
KCNF1Q9H3M0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC22.32■■□□□ 1.16
KCNF1Q9H3M0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC22.31■■□□□ 1.16
KCNF1Q9H3M0 AL691432.2-201ENST00000607222 2038 ntBASIC22.31■■□□□ 1.16
KCNF1Q9H3M0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
KCNF1Q9H3M0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
KCNF1Q9H3M0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KCNF1Q9H3M0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
KCNF1Q9H3M0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
KCNF1Q9H3M0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.31■■□□□ 1.16
KCNF1Q9H3M0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KCNF1Q9H3M0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.31■■□□□ 1.16
KCNF1Q9H3M0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
KCNF1Q9H3M0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
KCNF1Q9H3M0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.31■■□□□ 1.16
KCNF1Q9H3M0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.31■■□□□ 1.16
KCNF1Q9H3M0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.31■■□□□ 1.16
KCNF1Q9H3M0 AC012354.3-201ENST00000623734 483 ntBASIC22.31■■□□□ 1.16
KCNF1Q9H3M0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KCNF1Q9H3M0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
KCNF1Q9H3M0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KCNF1Q9H3M0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KCNF1Q9H3M0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC22.3■■□□□ 1.16
KCNF1Q9H3M0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC22.3■■□□□ 1.16
KCNF1Q9H3M0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KCNF1Q9H3M0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.3■■□□□ 1.16
KCNF1Q9H3M0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
KCNF1Q9H3M0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.3■■□□□ 1.16
KCNF1Q9H3M0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.3■■□□□ 1.16
KCNF1Q9H3M0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
KCNF1Q9H3M0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
KCNF1Q9H3M0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KCNF1Q9H3M0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
KCNF1Q9H3M0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KCNF1Q9H3M0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNF1Q9H3M0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNF1Q9H3M0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNF1Q9H3M0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
KCNF1Q9H3M0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNF1Q9H3M0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNF1Q9H3M0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC22.29■■□□□ 1.16
KCNF1Q9H3M0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
KCNF1Q9H3M0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNF1Q9H3M0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC22.29■■□□□ 1.16
KCNF1Q9H3M0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.29■■□□□ 1.16
KCNF1Q9H3M0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNF1Q9H3M0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.29■■□□□ 1.16
KCNF1Q9H3M0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
KCNF1Q9H3M0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms