Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC68Q9H2F9 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC68Q9H2F9 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC68Q9H2F9 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC68Q9H2F9 FP700111.2-201ENST00000619190 1892 ntBASIC20.45■□□□□ 0.86
CCDC68Q9H2F9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC68Q9H2F9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC68Q9H2F9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC68Q9H2F9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC68Q9H2F9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CCDC68Q9H2F9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CCDC68Q9H2F9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC68Q9H2F9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC68Q9H2F9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC68Q9H2F9 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC68Q9H2F9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC68Q9H2F9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC68Q9H2F9 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC68Q9H2F9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC68Q9H2F9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC68Q9H2F9 AC138932.1-201ENST00000534164 6830 ntBASIC20.44■□□□□ 0.86
CCDC68Q9H2F9 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CCDC68Q9H2F9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC68Q9H2F9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC68Q9H2F9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CCDC68Q9H2F9 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC68Q9H2F9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC68Q9H2F9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CCDC68Q9H2F9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CCDC68Q9H2F9 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC68Q9H2F9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC68Q9H2F9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC68Q9H2F9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CCDC68Q9H2F9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC68Q9H2F9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC68Q9H2F9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC68Q9H2F9 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC68Q9H2F9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC68Q9H2F9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC68Q9H2F9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.43■□□□□ 0.86
CCDC68Q9H2F9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.43■□□□□ 0.86
CCDC68Q9H2F9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC68Q9H2F9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC68Q9H2F9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC68Q9H2F9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC68Q9H2F9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC68Q9H2F9 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC68Q9H2F9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CCDC68Q9H2F9 LINC01521-201ENST00000504184 1943 ntBASIC20.43■□□□□ 0.86
CCDC68Q9H2F9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC68Q9H2F9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC68Q9H2F9 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CCDC68Q9H2F9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC68Q9H2F9 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CCDC68Q9H2F9 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC68Q9H2F9 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC68Q9H2F9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.42■□□□□ 0.86
CCDC68Q9H2F9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC68Q9H2F9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CCDC68Q9H2F9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC68Q9H2F9 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC68Q9H2F9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC68Q9H2F9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
CCDC68Q9H2F9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC68Q9H2F9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC68Q9H2F9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC68Q9H2F9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.42■□□□□ 0.86
CCDC68Q9H2F9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
CCDC68Q9H2F9 AC087623.3-201ENST00000607047 1098 ntBASIC20.42■□□□□ 0.86
CCDC68Q9H2F9 AC243732.1-201ENST00000612648 864 ntBASIC20.42■□□□□ 0.86
CCDC68Q9H2F9 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC68Q9H2F9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC68Q9H2F9 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC68Q9H2F9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC68Q9H2F9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC68Q9H2F9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC68Q9H2F9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC68Q9H2F9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC68Q9H2F9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC68Q9H2F9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC68Q9H2F9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CCDC68Q9H2F9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC68Q9H2F9 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC68Q9H2F9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC68Q9H2F9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC68Q9H2F9 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC68Q9H2F9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC68Q9H2F9 UBE2DNL-204ENST00000602536 740 ntBASIC20.41■□□□□ 0.86
CCDC68Q9H2F9 AC019069.1-201ENST00000610008 1333 ntBASIC20.41■□□□□ 0.86
CCDC68Q9H2F9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC68Q9H2F9 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC68Q9H2F9 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC68Q9H2F9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC68Q9H2F9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CCDC68Q9H2F9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC68Q9H2F9 LINC01006-201ENST00000333319 2292 ntBASIC20.41■□□□□ 0.86
CCDC68Q9H2F9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC68Q9H2F9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC68Q9H2F9 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC68Q9H2F9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms