Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CMSS1Q9BQ75 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CMSS1Q9BQ75 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CMSS1Q9BQ75 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CMSS1Q9BQ75 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
CMSS1Q9BQ75 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CMSS1Q9BQ75 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CMSS1Q9BQ75 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CMSS1Q9BQ75 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.42■□□□□ 0.38
CMSS1Q9BQ75 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CMSS1Q9BQ75 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CMSS1Q9BQ75 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CMSS1Q9BQ75 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CMSS1Q9BQ75 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.42■□□□□ 0.38
CMSS1Q9BQ75 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CMSS1Q9BQ75 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CMSS1Q9BQ75 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.42■□□□□ 0.38
CMSS1Q9BQ75 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
CMSS1Q9BQ75 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.42■□□□□ 0.38
CMSS1Q9BQ75 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CMSS1Q9BQ75 AC027682.1-201ENST00000562846 899 ntBASIC17.42■□□□□ 0.38
CMSS1Q9BQ75 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.42■□□□□ 0.38
CMSS1Q9BQ75 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.42■□□□□ 0.38
CMSS1Q9BQ75 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CMSS1Q9BQ75 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CMSS1Q9BQ75 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CMSS1Q9BQ75 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CMSS1Q9BQ75 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CMSS1Q9BQ75 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.42■□□□□ 0.38
CMSS1Q9BQ75 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CMSS1Q9BQ75 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CMSS1Q9BQ75 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.41■□□□□ 0.38
CMSS1Q9BQ75 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.41■□□□□ 0.38
CMSS1Q9BQ75 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.41■□□□□ 0.38
CMSS1Q9BQ75 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CMSS1Q9BQ75 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.41■□□□□ 0.38
CMSS1Q9BQ75 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CMSS1Q9BQ75 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CMSS1Q9BQ75 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.41■□□□□ 0.38
CMSS1Q9BQ75 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.41■□□□□ 0.38
CMSS1Q9BQ75 AP004607.4-201ENST00000530158 1459 ntBASIC17.41■□□□□ 0.38
CMSS1Q9BQ75 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CMSS1Q9BQ75 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CMSS1Q9BQ75 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.41■□□□□ 0.38
CMSS1Q9BQ75 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.41■□□□□ 0.38
CMSS1Q9BQ75 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.41■□□□□ 0.38
CMSS1Q9BQ75 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CMSS1Q9BQ75 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CMSS1Q9BQ75 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.41■□□□□ 0.38
CMSS1Q9BQ75 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
CMSS1Q9BQ75 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CMSS1Q9BQ75 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.41■□□□□ 0.38
CMSS1Q9BQ75 AC011484.1-201ENST00000377652 1995 ntBASIC17.4■□□□□ 0.38
CMSS1Q9BQ75 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.4■□□□□ 0.38
CMSS1Q9BQ75 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CMSS1Q9BQ75 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CMSS1Q9BQ75 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CMSS1Q9BQ75 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.4■□□□□ 0.38
CMSS1Q9BQ75 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CMSS1Q9BQ75 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CMSS1Q9BQ75 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CMSS1Q9BQ75 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.4■□□□□ 0.38
CMSS1Q9BQ75 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.4■□□□□ 0.38
CMSS1Q9BQ75 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.4■□□□□ 0.38
CMSS1Q9BQ75 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CMSS1Q9BQ75 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CMSS1Q9BQ75 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CMSS1Q9BQ75 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CMSS1Q9BQ75 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CMSS1Q9BQ75 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CMSS1Q9BQ75 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CMSS1Q9BQ75 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.39■□□□□ 0.38
CMSS1Q9BQ75 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CMSS1Q9BQ75 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.39■□□□□ 0.37
CMSS1Q9BQ75 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CMSS1Q9BQ75 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CMSS1Q9BQ75 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.39■□□□□ 0.37
CMSS1Q9BQ75 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CMSS1Q9BQ75 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.39■□□□□ 0.37
CMSS1Q9BQ75 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CMSS1Q9BQ75 AC053503.5-201ENST00000601508 636 ntBASIC17.39■□□□□ 0.37
CMSS1Q9BQ75 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CMSS1Q9BQ75 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CMSS1Q9BQ75 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CMSS1Q9BQ75 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CMSS1Q9BQ75 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.39■□□□□ 0.37
CMSS1Q9BQ75 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CMSS1Q9BQ75 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CMSS1Q9BQ75 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CMSS1Q9BQ75 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.38■□□□□ 0.37
CMSS1Q9BQ75 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CMSS1Q9BQ75 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CMSS1Q9BQ75 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.38■□□□□ 0.37
CMSS1Q9BQ75 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CMSS1Q9BQ75 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.38■□□□□ 0.37
CMSS1Q9BQ75 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.38■□□□□ 0.37
CMSS1Q9BQ75 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CMSS1Q9BQ75 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CMSS1Q9BQ75 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.38■□□□□ 0.37
CMSS1Q9BQ75 MIR572-201ENST00000384983 95 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms