Protein–RNA interactions for Protein: Q96E29

MTERF3, Transcription termination factor 3, mitochondrial, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTERF3Q96E29 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MTERF3Q96E29 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MTERF3Q96E29 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.46■□□□□ 0.71
MTERF3Q96E29 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.46■□□□□ 0.71
MTERF3Q96E29 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
MTERF3Q96E29 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
MTERF3Q96E29 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
MTERF3Q96E29 AC092667.1-201ENST00000434301 2586 ntBASIC19.45■□□□□ 0.7
MTERF3Q96E29 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MTERF3Q96E29 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MTERF3Q96E29 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.45■□□□□ 0.7
MTERF3Q96E29 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.45■□□□□ 0.7
MTERF3Q96E29 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MTERF3Q96E29 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.45■□□□□ 0.7
MTERF3Q96E29 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MTERF3Q96E29 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.45■□□□□ 0.7
MTERF3Q96E29 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MTERF3Q96E29 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.45■□□□□ 0.7
MTERF3Q96E29 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MTERF3Q96E29 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
MTERF3Q96E29 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
MTERF3Q96E29 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MTERF3Q96E29 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.44■□□□□ 0.7
MTERF3Q96E29 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MTERF3Q96E29 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MTERF3Q96E29 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.44■□□□□ 0.7
MTERF3Q96E29 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MTERF3Q96E29 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
MTERF3Q96E29 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.44■□□□□ 0.7
MTERF3Q96E29 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.44■□□□□ 0.7
MTERF3Q96E29 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MTERF3Q96E29 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.44■□□□□ 0.7
MTERF3Q96E29 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
MTERF3Q96E29 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
MTERF3Q96E29 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.44■□□□□ 0.7
MTERF3Q96E29 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MTERF3Q96E29 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
MTERF3Q96E29 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
MTERF3Q96E29 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MTERF3Q96E29 RBM17P2-201ENST00000616397 1405 ntBASIC19.43■□□□□ 0.7
MTERF3Q96E29 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MTERF3Q96E29 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MTERF3Q96E29 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MTERF3Q96E29 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MTERF3Q96E29 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MTERF3Q96E29 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
MTERF3Q96E29 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MTERF3Q96E29 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.43■□□□□ 0.7
MTERF3Q96E29 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MTERF3Q96E29 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
MTERF3Q96E29 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MTERF3Q96E29 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.43■□□□□ 0.7
MTERF3Q96E29 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.43■□□□□ 0.7
MTERF3Q96E29 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MTERF3Q96E29 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.43■□□□□ 0.7
MTERF3Q96E29 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.43■□□□□ 0.7
MTERF3Q96E29 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.43■□□□□ 0.7
MTERF3Q96E29 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MTERF3Q96E29 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
MTERF3Q96E29 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
MTERF3Q96E29 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MTERF3Q96E29 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MTERF3Q96E29 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
MTERF3Q96E29 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
MTERF3Q96E29 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MTERF3Q96E29 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MTERF3Q96E29 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MTERF3Q96E29 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.43■□□□□ 0.7
MTERF3Q96E29 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
MTERF3Q96E29 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MTERF3Q96E29 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MTERF3Q96E29 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.42■□□□□ 0.7
MTERF3Q96E29 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
MTERF3Q96E29 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MTERF3Q96E29 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
MTERF3Q96E29 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MTERF3Q96E29 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
MTERF3Q96E29 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MTERF3Q96E29 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MTERF3Q96E29 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MTERF3Q96E29 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MTERF3Q96E29 AC091799.1-201ENST00000422823 811 ntBASIC19.42■□□□□ 0.7
MTERF3Q96E29 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MTERF3Q96E29 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.42■□□□□ 0.7
MTERF3Q96E29 MIR2861-201ENST00000636310 90 ntBASIC19.42■□□□□ 0.7
MTERF3Q96E29 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
MTERF3Q96E29 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MTERF3Q96E29 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
MTERF3Q96E29 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
MTERF3Q96E29 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.42■□□□□ 0.7
MTERF3Q96E29 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
MTERF3Q96E29 AC019069.1-201ENST00000610008 1333 ntBASIC19.42■□□□□ 0.7
MTERF3Q96E29 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.42■□□□□ 0.7
MTERF3Q96E29 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
MTERF3Q96E29 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.42■□□□□ 0.7
MTERF3Q96E29 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MTERF3Q96E29 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.42■□□□□ 0.7
MTERF3Q96E29 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
MTERF3Q96E29 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.41■□□□□ 0.7
MTERF3Q96E29 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms