Protein–RNA interactions for Protein: Q92629

SGCD, Delta-sarcoglycan, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCDQ92629 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SGCDQ92629 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SGCDQ92629 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.68■□□□□ 0.58
SGCDQ92629 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.68■□□□□ 0.58
SGCDQ92629 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.67■□□□□ 0.58
SGCDQ92629 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SGCDQ92629 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SGCDQ92629 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SGCDQ92629 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SGCDQ92629 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SGCDQ92629 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.67■□□□□ 0.58
SGCDQ92629 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.67■□□□□ 0.58
SGCDQ92629 GUSBP5-201ENST00000418136 578 ntBASIC18.67■□□□□ 0.58
SGCDQ92629 AC241377.3-202ENST00000626088 1088 ntBASIC18.67■□□□□ 0.58
SGCDQ92629 AC241585.3-202ENST00000628937 1088 ntBASIC18.67■□□□□ 0.58
SGCDQ92629 AC245100.8-202ENST00000629247 1058 ntBASIC18.67■□□□□ 0.58
SGCDQ92629 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.67■□□□□ 0.58
SGCDQ92629 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SGCDQ92629 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SGCDQ92629 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SGCDQ92629 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SGCDQ92629 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SGCDQ92629 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SGCDQ92629 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SGCDQ92629 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.66■□□□□ 0.58
SGCDQ92629 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.66■□□□□ 0.58
SGCDQ92629 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.66■□□□□ 0.58
SGCDQ92629 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
SGCDQ92629 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.66■□□□□ 0.58
SGCDQ92629 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SGCDQ92629 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.66■□□□□ 0.58
SGCDQ92629 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SGCDQ92629 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.66■□□□□ 0.58
SGCDQ92629 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SGCDQ92629 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.66■□□□□ 0.58
SGCDQ92629 AL117332.1-201ENST00000622628 974 ntBASIC18.66■□□□□ 0.58
SGCDQ92629 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SGCDQ92629 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SGCDQ92629 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SGCDQ92629 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
SGCDQ92629 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
SGCDQ92629 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SGCDQ92629 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SGCDQ92629 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SGCDQ92629 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SGCDQ92629 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SGCDQ92629 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SGCDQ92629 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SGCDQ92629 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SGCDQ92629 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SGCDQ92629 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SGCDQ92629 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SGCDQ92629 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SGCDQ92629 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SGCDQ92629 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SGCDQ92629 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.65■□□□□ 0.58
SGCDQ92629 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
SGCDQ92629 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SGCDQ92629 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SGCDQ92629 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SGCDQ92629 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SGCDQ92629 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SGCDQ92629 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SGCDQ92629 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SGCDQ92629 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SGCDQ92629 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SGCDQ92629 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SGCDQ92629 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SGCDQ92629 BX005040.4-201ENST00000637145 1518 ntBASIC18.64■□□□□ 0.58
SGCDQ92629 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.64■□□□□ 0.58
SGCDQ92629 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.64■□□□□ 0.58
SGCDQ92629 AC005332.7-201ENST00000614046 2005 ntBASIC18.64■□□□□ 0.58
SGCDQ92629 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SGCDQ92629 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SGCDQ92629 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.64■□□□□ 0.57
SGCDQ92629 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.64■□□□□ 0.57
SGCDQ92629 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SGCDQ92629 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.64■□□□□ 0.57
SGCDQ92629 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SGCDQ92629 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
SGCDQ92629 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SGCDQ92629 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SGCDQ92629 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SGCDQ92629 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SGCDQ92629 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SGCDQ92629 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.63■□□□□ 0.57
SGCDQ92629 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SGCDQ92629 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SGCDQ92629 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SGCDQ92629 MIR3181-201ENST00000578512 73 ntBASIC18.63■□□□□ 0.57
SGCDQ92629 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SGCDQ92629 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
SGCDQ92629 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SGCDQ92629 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SGCDQ92629 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
SGCDQ92629 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SGCDQ92629 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SGCDQ92629 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SGCDQ92629 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SGCDQ92629 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms