Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.88■□□□□ 0.93
SCG3Q8WXD2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.88■□□□□ 0.93
SCG3Q8WXD2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.88■□□□□ 0.93
SCG3Q8WXD2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SCG3Q8WXD2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCG3Q8WXD2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SCG3Q8WXD2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCG3Q8WXD2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCG3Q8WXD2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
SCG3Q8WXD2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCG3Q8WXD2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SCG3Q8WXD2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCG3Q8WXD2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCG3Q8WXD2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCG3Q8WXD2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCG3Q8WXD2 GPX1P1-201ENST00000388829 606 ntBASIC20.87■□□□□ 0.93
SCG3Q8WXD2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.87■□□□□ 0.93
SCG3Q8WXD2 AC010141.2-201ENST00000452426 721 ntBASIC20.87■□□□□ 0.93
SCG3Q8WXD2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.87■□□□□ 0.93
SCG3Q8WXD2 AC104771.1-201ENST00000603335 964 ntBASIC20.87■□□□□ 0.93
SCG3Q8WXD2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCG3Q8WXD2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCG3Q8WXD2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.87■□□□□ 0.93
SCG3Q8WXD2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCG3Q8WXD2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCG3Q8WXD2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SCG3Q8WXD2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.86■□□□□ 0.93
SCG3Q8WXD2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.86■□□□□ 0.93
SCG3Q8WXD2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SCG3Q8WXD2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCG3Q8WXD2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SCG3Q8WXD2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SCG3Q8WXD2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.86■□□□□ 0.93
SCG3Q8WXD2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.86■□□□□ 0.93
SCG3Q8WXD2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCG3Q8WXD2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCG3Q8WXD2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.86■□□□□ 0.93
SCG3Q8WXD2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCG3Q8WXD2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SCG3Q8WXD2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SCG3Q8WXD2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.85■□□□□ 0.93
SCG3Q8WXD2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.85■□□□□ 0.93
SCG3Q8WXD2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCG3Q8WXD2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCG3Q8WXD2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.85■□□□□ 0.93
SCG3Q8WXD2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.85■□□□□ 0.93
SCG3Q8WXD2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
SCG3Q8WXD2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.85■□□□□ 0.93
SCG3Q8WXD2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.85■□□□□ 0.93
SCG3Q8WXD2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SCG3Q8WXD2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCG3Q8WXD2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SCG3Q8WXD2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SCG3Q8WXD2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCG3Q8WXD2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.85■□□□□ 0.93
SCG3Q8WXD2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCG3Q8WXD2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCG3Q8WXD2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SCG3Q8WXD2 POU5F1P4-201ENST00000413175 1085 ntBASIC20.84■□□□□ 0.93
SCG3Q8WXD2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.84■□□□□ 0.93
SCG3Q8WXD2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.84■□□□□ 0.93
SCG3Q8WXD2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.84■□□□□ 0.93
SCG3Q8WXD2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.84■□□□□ 0.93
SCG3Q8WXD2 DUX4L16-201ENST00000555130 1264 ntBASIC20.84■□□□□ 0.93
SCG3Q8WXD2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.84■□□□□ 0.93
SCG3Q8WXD2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCG3Q8WXD2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SCG3Q8WXD2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCG3Q8WXD2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCG3Q8WXD2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCG3Q8WXD2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.84■□□□□ 0.93
SCG3Q8WXD2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCG3Q8WXD2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SCG3Q8WXD2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCG3Q8WXD2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCG3Q8WXD2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCG3Q8WXD2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCG3Q8WXD2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCG3Q8WXD2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCG3Q8WXD2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.83■□□□□ 0.93
SCG3Q8WXD2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCG3Q8WXD2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SCG3Q8WXD2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SCG3Q8WXD2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.83■□□□□ 0.93
SCG3Q8WXD2 AL121832.2-201ENST00000610979 668 ntBASIC20.83■□□□□ 0.93
SCG3Q8WXD2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCG3Q8WXD2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.83■□□□□ 0.93
SCG3Q8WXD2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.83■□□□□ 0.93
SCG3Q8WXD2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCG3Q8WXD2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SCG3Q8WXD2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
SCG3Q8WXD2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SCG3Q8WXD2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCG3Q8WXD2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCG3Q8WXD2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCG3Q8WXD2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCG3Q8WXD2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCG3Q8WXD2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCG3Q8WXD2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SCG3Q8WXD2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms