Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.31■□□□□ 0.84
CKAP2Q8WWK9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.31■□□□□ 0.84
CKAP2Q8WWK9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.31■□□□□ 0.84
CKAP2Q8WWK9 AC009299.2-201ENST00000482477 511 ntBASIC20.31■□□□□ 0.84
CKAP2Q8WWK9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CKAP2Q8WWK9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CKAP2Q8WWK9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.31■□□□□ 0.84
CKAP2Q8WWK9 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CKAP2Q8WWK9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CKAP2Q8WWK9 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.31■□□□□ 0.84
CKAP2Q8WWK9 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.31■□□□□ 0.84
CKAP2Q8WWK9 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CKAP2Q8WWK9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CKAP2Q8WWK9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CKAP2Q8WWK9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.3■□□□□ 0.84
CKAP2Q8WWK9 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CKAP2Q8WWK9 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CKAP2Q8WWK9 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.3■□□□□ 0.84
CKAP2Q8WWK9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CKAP2Q8WWK9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CKAP2Q8WWK9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.3■□□□□ 0.84
CKAP2Q8WWK9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.3■□□□□ 0.84
CKAP2Q8WWK9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.3■□□□□ 0.84
CKAP2Q8WWK9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CKAP2Q8WWK9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.3■□□□□ 0.84
CKAP2Q8WWK9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.3■□□□□ 0.84
CKAP2Q8WWK9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.3■□□□□ 0.84
CKAP2Q8WWK9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CKAP2Q8WWK9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CKAP2Q8WWK9 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.3■□□□□ 0.84
CKAP2Q8WWK9 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CKAP2Q8WWK9 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.3■□□□□ 0.84
CKAP2Q8WWK9 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CKAP2Q8WWK9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CKAP2Q8WWK9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CKAP2Q8WWK9 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CKAP2Q8WWK9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CKAP2Q8WWK9 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CKAP2Q8WWK9 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.29■□□□□ 0.84
CKAP2Q8WWK9 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.29■□□□□ 0.84
CKAP2Q8WWK9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CKAP2Q8WWK9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.29■□□□□ 0.84
CKAP2Q8WWK9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CKAP2Q8WWK9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.29■□□□□ 0.84
CKAP2Q8WWK9 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CKAP2Q8WWK9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CKAP2Q8WWK9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CKAP2Q8WWK9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CKAP2Q8WWK9 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.29■□□□□ 0.84
CKAP2Q8WWK9 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.29■□□□□ 0.84
CKAP2Q8WWK9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CKAP2Q8WWK9 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CKAP2Q8WWK9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.29■□□□□ 0.84
CKAP2Q8WWK9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CKAP2Q8WWK9 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CKAP2Q8WWK9 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.29■□□□□ 0.84
CKAP2Q8WWK9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CKAP2Q8WWK9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CKAP2Q8WWK9 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.29■□□□□ 0.84
CKAP2Q8WWK9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
CKAP2Q8WWK9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.28■□□□□ 0.84
CKAP2Q8WWK9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CKAP2Q8WWK9 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.28■□□□□ 0.84
CKAP2Q8WWK9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CKAP2Q8WWK9 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CKAP2Q8WWK9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.28■□□□□ 0.84
CKAP2Q8WWK9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CKAP2Q8WWK9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.28■□□□□ 0.84
CKAP2Q8WWK9 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.28■□□□□ 0.84
CKAP2Q8WWK9 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CKAP2Q8WWK9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.28■□□□□ 0.84
CKAP2Q8WWK9 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CKAP2Q8WWK9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CKAP2Q8WWK9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CKAP2Q8WWK9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.28■□□□□ 0.84
CKAP2Q8WWK9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.28■□□□□ 0.84
CKAP2Q8WWK9 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CKAP2Q8WWK9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CKAP2Q8WWK9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
CKAP2Q8WWK9 AC009237.3-201ENST00000393279 1427 ntBASIC20.27■□□□□ 0.84
CKAP2Q8WWK9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.27■□□□□ 0.84
CKAP2Q8WWK9 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.27■□□□□ 0.84
CKAP2Q8WWK9 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CKAP2Q8WWK9 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CKAP2Q8WWK9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CKAP2Q8WWK9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CKAP2Q8WWK9 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.27■□□□□ 0.84
CKAP2Q8WWK9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CKAP2Q8WWK9 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CKAP2Q8WWK9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
CKAP2Q8WWK9 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.27■□□□□ 0.84
CKAP2Q8WWK9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.27■□□□□ 0.84
CKAP2Q8WWK9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CKAP2Q8WWK9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.27■□□□□ 0.84
CKAP2Q8WWK9 SRD5A1P1-201ENST00000442297 786 ntBASIC20.27■□□□□ 0.84
CKAP2Q8WWK9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.27■□□□□ 0.84
CKAP2Q8WWK9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.27■□□□□ 0.84
CKAP2Q8WWK9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CKAP2Q8WWK9 AL138724.1-201ENST00000606771 1088 ntBASIC20.27■□□□□ 0.84
CKAP2Q8WWK9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms