Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMIM4Q8WVI0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.48■□□□□ 0.39
SMIM4Q8WVI0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMIM4Q8WVI0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.48■□□□□ 0.39
SMIM4Q8WVI0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.48■□□□□ 0.39
SMIM4Q8WVI0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.48■□□□□ 0.39
SMIM4Q8WVI0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMIM4Q8WVI0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.48■□□□□ 0.39
SMIM4Q8WVI0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.48■□□□□ 0.39
SMIM4Q8WVI0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMIM4Q8WVI0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SMIM4Q8WVI0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.48■□□□□ 0.39
SMIM4Q8WVI0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMIM4Q8WVI0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMIM4Q8WVI0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.48■□□□□ 0.39
SMIM4Q8WVI0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SMIM4Q8WVI0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.47■□□□□ 0.39
SMIM4Q8WVI0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM4Q8WVI0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM4Q8WVI0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM4Q8WVI0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM4Q8WVI0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.47■□□□□ 0.39
SMIM4Q8WVI0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM4Q8WVI0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.47■□□□□ 0.39
SMIM4Q8WVI0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM4Q8WVI0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM4Q8WVI0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM4Q8WVI0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM4Q8WVI0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.47■□□□□ 0.39
SMIM4Q8WVI0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.47■□□□□ 0.39
SMIM4Q8WVI0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM4Q8WVI0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM4Q8WVI0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM4Q8WVI0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM4Q8WVI0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.47■□□□□ 0.39
SMIM4Q8WVI0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SMIM4Q8WVI0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMIM4Q8WVI0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.47■□□□□ 0.39
SMIM4Q8WVI0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SMIM4Q8WVI0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SMIM4Q8WVI0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM4Q8WVI0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM4Q8WVI0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SMIM4Q8WVI0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SMIM4Q8WVI0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM4Q8WVI0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.46■□□□□ 0.39
SMIM4Q8WVI0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM4Q8WVI0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM4Q8WVI0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM4Q8WVI0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM4Q8WVI0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.46■□□□□ 0.39
SMIM4Q8WVI0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM4Q8WVI0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.46■□□□□ 0.39
SMIM4Q8WVI0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.46■□□□□ 0.39
SMIM4Q8WVI0 AP005435.1-201ENST00000529293 1178 ntBASIC17.46■□□□□ 0.39
SMIM4Q8WVI0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM4Q8WVI0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMIM4Q8WVI0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.46■□□□□ 0.39
SMIM4Q8WVI0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.46■□□□□ 0.38
SMIM4Q8WVI0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SMIM4Q8WVI0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
SMIM4Q8WVI0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
SMIM4Q8WVI0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SMIM4Q8WVI0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SMIM4Q8WVI0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM4Q8WVI0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM4Q8WVI0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM4Q8WVI0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM4Q8WVI0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SMIM4Q8WVI0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM4Q8WVI0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM4Q8WVI0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM4Q8WVI0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM4Q8WVI0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.45■□□□□ 0.38
SMIM4Q8WVI0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM4Q8WVI0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM4Q8WVI0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM4Q8WVI0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM4Q8WVI0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM4Q8WVI0 MIR4787-201ENST00000607364 84 ntBASIC17.45■□□□□ 0.38
SMIM4Q8WVI0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.45■□□□□ 0.38
SMIM4Q8WVI0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.45■□□□□ 0.38
SMIM4Q8WVI0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.45■□□□□ 0.38
SMIM4Q8WVI0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM4Q8WVI0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM4Q8WVI0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM4Q8WVI0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SMIM4Q8WVI0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SMIM4Q8WVI0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.45■□□□□ 0.38
SMIM4Q8WVI0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMIM4Q8WVI0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMIM4Q8WVI0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMIM4Q8WVI0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMIM4Q8WVI0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SMIM4Q8WVI0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.44■□□□□ 0.38
SMIM4Q8WVI0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.44■□□□□ 0.38
SMIM4Q8WVI0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.44■□□□□ 0.38
SMIM4Q8WVI0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.44■□□□□ 0.38
SMIM4Q8WVI0 AC093484.2-201ENST00000580996 2166 ntBASIC17.44■□□□□ 0.38
SMIM4Q8WVI0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms