Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHROOM3Q8TF72 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHROOM3Q8TF72 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SHROOM3Q8TF72 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SHROOM3Q8TF72 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.92■□□□□ 0.94
SHROOM3Q8TF72 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHROOM3Q8TF72 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.92■□□□□ 0.94
SHROOM3Q8TF72 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.92■□□□□ 0.94
SHROOM3Q8TF72 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHROOM3Q8TF72 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.91■□□□□ 0.94
SHROOM3Q8TF72 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHROOM3Q8TF72 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHROOM3Q8TF72 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHROOM3Q8TF72 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHROOM3Q8TF72 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.91■□□□□ 0.94
SHROOM3Q8TF72 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SHROOM3Q8TF72 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.91■□□□□ 0.94
SHROOM3Q8TF72 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHROOM3Q8TF72 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
SHROOM3Q8TF72 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.91■□□□□ 0.94
SHROOM3Q8TF72 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHROOM3Q8TF72 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SHROOM3Q8TF72 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHROOM3Q8TF72 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHROOM3Q8TF72 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHROOM3Q8TF72 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SHROOM3Q8TF72 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SHROOM3Q8TF72 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHROOM3Q8TF72 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SHROOM3Q8TF72 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHROOM3Q8TF72 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHROOM3Q8TF72 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SHROOM3Q8TF72 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.9■□□□□ 0.94
SHROOM3Q8TF72 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.9■□□□□ 0.94
SHROOM3Q8TF72 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SHROOM3Q8TF72 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.9■□□□□ 0.94
SHROOM3Q8TF72 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHROOM3Q8TF72 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SHROOM3Q8TF72 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SHROOM3Q8TF72 KRT18P6-201ENST00000555540 1265 ntBASIC20.9■□□□□ 0.94
SHROOM3Q8TF72 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHROOM3Q8TF72 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHROOM3Q8TF72 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SHROOM3Q8TF72 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SHROOM3Q8TF72 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHROOM3Q8TF72 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHROOM3Q8TF72 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.9■□□□□ 0.94
SHROOM3Q8TF72 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHROOM3Q8TF72 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SHROOM3Q8TF72 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
SHROOM3Q8TF72 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SHROOM3Q8TF72 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SHROOM3Q8TF72 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SHROOM3Q8TF72 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SHROOM3Q8TF72 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SHROOM3Q8TF72 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHROOM3Q8TF72 GPX1P1-201ENST00000388829 606 ntBASIC20.89■□□□□ 0.93
SHROOM3Q8TF72 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.89■□□□□ 0.93
SHROOM3Q8TF72 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHROOM3Q8TF72 AL591742.1-201ENST00000604433 565 ntBASIC20.89■□□□□ 0.93
SHROOM3Q8TF72 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
SHROOM3Q8TF72 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHROOM3Q8TF72 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.89■□□□□ 0.93
SHROOM3Q8TF72 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHROOM3Q8TF72 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.89■□□□□ 0.93
SHROOM3Q8TF72 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.89■□□□□ 0.93
SHROOM3Q8TF72 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
SHROOM3Q8TF72 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SHROOM3Q8TF72 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.89■□□□□ 0.93
SHROOM3Q8TF72 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SHROOM3Q8TF72 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.88■□□□□ 0.93
SHROOM3Q8TF72 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SHROOM3Q8TF72 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.88■□□□□ 0.93
SHROOM3Q8TF72 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHROOM3Q8TF72 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SHROOM3Q8TF72 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHROOM3Q8TF72 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHROOM3Q8TF72 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SHROOM3Q8TF72 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHROOM3Q8TF72 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.88■□□□□ 0.93
SHROOM3Q8TF72 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.88■□□□□ 0.93
SHROOM3Q8TF72 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHROOM3Q8TF72 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SHROOM3Q8TF72 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.88■□□□□ 0.93
SHROOM3Q8TF72 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SHROOM3Q8TF72 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHROOM3Q8TF72 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SHROOM3Q8TF72 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SHROOM3Q8TF72 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.88■□□□□ 0.93
SHROOM3Q8TF72 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHROOM3Q8TF72 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHROOM3Q8TF72 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SHROOM3Q8TF72 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHROOM3Q8TF72 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHROOM3Q8TF72 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHROOM3Q8TF72 AC027702.1-201ENST00000563810 1770 ntBASIC20.87■□□□□ 0.93
SHROOM3Q8TF72 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SHROOM3Q8TF72 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHROOM3Q8TF72 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.87■□□□□ 0.93
SHROOM3Q8TF72 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms