Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SIX5Q8N196 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SIX5Q8N196 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SIX5Q8N196 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SIX5Q8N196 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SIX5Q8N196 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SIX5Q8N196 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SIX5Q8N196 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SIX5Q8N196 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SIX5Q8N196 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SIX5Q8N196 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21■□□□□ 0.95
SIX5Q8N196 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SIX5Q8N196 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21■□□□□ 0.95
SIX5Q8N196 AL049597.2-201ENST00000565575 961 ntBASIC21■□□□□ 0.95
SIX5Q8N196 AC005829.2-201ENST00000571422 1056 ntBASIC21■□□□□ 0.95
SIX5Q8N196 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21■□□□□ 0.95
SIX5Q8N196 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21■□□□□ 0.95
SIX5Q8N196 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SIX5Q8N196 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21■□□□□ 0.95
SIX5Q8N196 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21■□□□□ 0.95
SIX5Q8N196 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21■□□□□ 0.95
SIX5Q8N196 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIX5Q8N196 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIX5Q8N196 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIX5Q8N196 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIX5Q8N196 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SIX5Q8N196 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SIX5Q8N196 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.99■□□□□ 0.95
SIX5Q8N196 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIX5Q8N196 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SIX5Q8N196 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
SIX5Q8N196 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.99■□□□□ 0.95
SIX5Q8N196 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
SIX5Q8N196 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.99■□□□□ 0.95
SIX5Q8N196 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.99■□□□□ 0.95
SIX5Q8N196 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SIX5Q8N196 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SIX5Q8N196 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.99■□□□□ 0.95
SIX5Q8N196 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SIX5Q8N196 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SIX5Q8N196 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIX5Q8N196 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.99■□□□□ 0.95
SIX5Q8N196 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SIX5Q8N196 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SIX5Q8N196 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIX5Q8N196 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SIX5Q8N196 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIX5Q8N196 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIX5Q8N196 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SIX5Q8N196 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIX5Q8N196 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.98■□□□□ 0.95
SIX5Q8N196 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIX5Q8N196 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIX5Q8N196 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIX5Q8N196 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SIX5Q8N196 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.98■□□□□ 0.95
SIX5Q8N196 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.98■□□□□ 0.95
SIX5Q8N196 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
SIX5Q8N196 AP003071.4-201ENST00000562276 1284 ntBASIC20.98■□□□□ 0.95
SIX5Q8N196 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.98■□□□□ 0.95
SIX5Q8N196 AL590326.2-201ENST00000625139 305 ntBASIC20.98■□□□□ 0.95
SIX5Q8N196 AC092053.2-201ENST00000640557 1818 ntBASIC20.98■□□□□ 0.95
SIX5Q8N196 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SIX5Q8N196 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.98■□□□□ 0.95
SIX5Q8N196 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIX5Q8N196 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SIX5Q8N196 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.97■□□□□ 0.95
SIX5Q8N196 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SIX5Q8N196 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIX5Q8N196 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SIX5Q8N196 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SIX5Q8N196 MMP23A-201ENST00000234610 1017 ntBASIC20.97■□□□□ 0.95
SIX5Q8N196 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SIX5Q8N196 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SIX5Q8N196 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIX5Q8N196 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SIX5Q8N196 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.97■□□□□ 0.95
SIX5Q8N196 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SIX5Q8N196 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SIX5Q8N196 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIX5Q8N196 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.97■□□□□ 0.95
SIX5Q8N196 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIX5Q8N196 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SIX5Q8N196 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SIX5Q8N196 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SIX5Q8N196 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.96■□□□□ 0.95
SIX5Q8N196 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SIX5Q8N196 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIX5Q8N196 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.96■□□□□ 0.95
SIX5Q8N196 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SIX5Q8N196 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIX5Q8N196 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SIX5Q8N196 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SIX5Q8N196 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.96■□□□□ 0.95
SIX5Q8N196 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIX5Q8N196 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIX5Q8N196 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SIX5Q8N196 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIX5Q8N196 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.95■□□□□ 0.95
SIX5Q8N196 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms