Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC170Q8IYT3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.97■■□□□ 1.11
CCDC170Q8IYT3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
CCDC170Q8IYT3 KRT16P2-201ENST00000414673 1423 ntBASIC21.97■■□□□ 1.11
CCDC170Q8IYT3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCDC170Q8IYT3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC170Q8IYT3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
CCDC170Q8IYT3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC170Q8IYT3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
CCDC170Q8IYT3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC170Q8IYT3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC170Q8IYT3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.96■■□□□ 1.11
CCDC170Q8IYT3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.96■■□□□ 1.11
CCDC170Q8IYT3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC170Q8IYT3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
CCDC170Q8IYT3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.96■■□□□ 1.11
CCDC170Q8IYT3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC170Q8IYT3 MIR939-201ENST00000401314 82 ntBASIC21.96■■□□□ 1.11
CCDC170Q8IYT3 AC245052.3-201ENST00000450182 901 ntBASIC21.96■■□□□ 1.11
CCDC170Q8IYT3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC170Q8IYT3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.96■■□□□ 1.11
CCDC170Q8IYT3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.96■■□□□ 1.11
CCDC170Q8IYT3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.96■■□□□ 1.11
CCDC170Q8IYT3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.96■■□□□ 1.11
CCDC170Q8IYT3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC170Q8IYT3 AL355001.2-201ENST00000620617 1191 ntBASIC21.96■■□□□ 1.11
CCDC170Q8IYT3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CCDC170Q8IYT3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.96■■□□□ 1.11
CCDC170Q8IYT3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC170Q8IYT3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
CCDC170Q8IYT3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCDC170Q8IYT3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.96■■□□□ 1.11
CCDC170Q8IYT3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC170Q8IYT3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC170Q8IYT3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.95■■□□□ 1.1
CCDC170Q8IYT3 AC096631.2-201ENST00000436136 790 ntBASIC21.95■■□□□ 1.1
CCDC170Q8IYT3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.95■■□□□ 1.1
CCDC170Q8IYT3 AC091305.1-201ENST00000479476 895 ntBASIC21.95■■□□□ 1.1
CCDC170Q8IYT3 AL354811.1-201ENST00000610286 706 ntBASIC21.95■■□□□ 1.1
CCDC170Q8IYT3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.95■■□□□ 1.1
CCDC170Q8IYT3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC170Q8IYT3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC170Q8IYT3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC170Q8IYT3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC170Q8IYT3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC170Q8IYT3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC170Q8IYT3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC170Q8IYT3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.94■■□□□ 1.1
CCDC170Q8IYT3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC170Q8IYT3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC170Q8IYT3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC170Q8IYT3 AC138907.5-202ENST00000569484 235 ntBASIC21.94■■□□□ 1.1
CCDC170Q8IYT3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC170Q8IYT3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC170Q8IYT3 KRT87P-202ENST00000534226 1464 ntBASIC21.94■■□□□ 1.1
CCDC170Q8IYT3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.94■■□□□ 1.1
CCDC170Q8IYT3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC170Q8IYT3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.94■■□□□ 1.1
CCDC170Q8IYT3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.94■■□□□ 1.1
CCDC170Q8IYT3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.94■■□□□ 1.1
CCDC170Q8IYT3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC170Q8IYT3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CCDC170Q8IYT3 RNF165-205ENST00000588679 2904 ntBASIC21.93■■□□□ 1.1
CCDC170Q8IYT3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC170Q8IYT3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC170Q8IYT3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC170Q8IYT3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC170Q8IYT3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC170Q8IYT3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC170Q8IYT3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC170Q8IYT3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.93■■□□□ 1.1
CCDC170Q8IYT3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.93■■□□□ 1.1
CCDC170Q8IYT3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC170Q8IYT3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.93■■□□□ 1.1
CCDC170Q8IYT3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.93■■□□□ 1.1
CCDC170Q8IYT3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.93■■□□□ 1.1
CCDC170Q8IYT3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC170Q8IYT3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC170Q8IYT3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC170Q8IYT3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC170Q8IYT3 AC116050.2-201ENST00000612102 1779 ntBASIC21.92■■□□□ 1.1
CCDC170Q8IYT3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC170Q8IYT3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC170Q8IYT3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC170Q8IYT3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.92■■□□□ 1.1
CCDC170Q8IYT3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.92■■□□□ 1.1
CCDC170Q8IYT3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC170Q8IYT3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC170Q8IYT3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC170Q8IYT3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CCDC170Q8IYT3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC170Q8IYT3 SMG8-203ENST00000578922 2178 ntBASIC21.92■■□□□ 1.1
CCDC170Q8IYT3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CCDC170Q8IYT3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC170Q8IYT3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
CCDC170Q8IYT3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC170Q8IYT3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC170Q8IYT3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC170Q8IYT3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC170Q8IYT3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms