Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
LYSMD3Q7Z3D4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LYSMD3Q7Z3D4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LYSMD3Q7Z3D4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.55■□□□□ 0.88
LYSMD3Q7Z3D4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.55■□□□□ 0.88
LYSMD3Q7Z3D4 AC027702.1-201ENST00000563810 1770 ntBASIC20.55■□□□□ 0.88
LYSMD3Q7Z3D4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LYSMD3Q7Z3D4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
LYSMD3Q7Z3D4 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.55■□□□□ 0.88
LYSMD3Q7Z3D4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.55■□□□□ 0.88
LYSMD3Q7Z3D4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.55■□□□□ 0.88
LYSMD3Q7Z3D4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LYSMD3Q7Z3D4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.55■□□□□ 0.88
LYSMD3Q7Z3D4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LYSMD3Q7Z3D4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LYSMD3Q7Z3D4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
LYSMD3Q7Z3D4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
LYSMD3Q7Z3D4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LYSMD3Q7Z3D4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LYSMD3Q7Z3D4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.54■□□□□ 0.88
LYSMD3Q7Z3D4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LYSMD3Q7Z3D4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LYSMD3Q7Z3D4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.54■□□□□ 0.88
LYSMD3Q7Z3D4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.54■□□□□ 0.88
LYSMD3Q7Z3D4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.54■□□□□ 0.88
LYSMD3Q7Z3D4 HLA-L-209ENST00000420110 1011 ntBASIC20.54■□□□□ 0.88
LYSMD3Q7Z3D4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.54■□□□□ 0.88
LYSMD3Q7Z3D4 NCF1B-203ENST00000435988 1254 ntBASIC20.54■□□□□ 0.88
LYSMD3Q7Z3D4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LYSMD3Q7Z3D4 AF201337.1-201ENST00000520239 748 ntBASIC20.54■□□□□ 0.88
LYSMD3Q7Z3D4 AC105036.2-201ENST00000569468 176 ntBASIC20.54■□□□□ 0.88
LYSMD3Q7Z3D4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LYSMD3Q7Z3D4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.54■□□□□ 0.88
LYSMD3Q7Z3D4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LYSMD3Q7Z3D4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.54■□□□□ 0.88
LYSMD3Q7Z3D4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LYSMD3Q7Z3D4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LYSMD3Q7Z3D4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LYSMD3Q7Z3D4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.54■□□□□ 0.88
LYSMD3Q7Z3D4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LYSMD3Q7Z3D4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LYSMD3Q7Z3D4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.53■□□□□ 0.88
LYSMD3Q7Z3D4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LYSMD3Q7Z3D4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LYSMD3Q7Z3D4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LYSMD3Q7Z3D4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
LYSMD3Q7Z3D4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.53■□□□□ 0.88
LYSMD3Q7Z3D4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.53■□□□□ 0.88
LYSMD3Q7Z3D4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LYSMD3Q7Z3D4 AC083906.2-201ENST00000511578 360 ntBASIC20.53■□□□□ 0.88
LYSMD3Q7Z3D4 AL121832.2-201ENST00000610979 668 ntBASIC20.53■□□□□ 0.88
LYSMD3Q7Z3D4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LYSMD3Q7Z3D4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LYSMD3Q7Z3D4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LYSMD3Q7Z3D4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LYSMD3Q7Z3D4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.53■□□□□ 0.88
LYSMD3Q7Z3D4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.53■□□□□ 0.88
LYSMD3Q7Z3D4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LYSMD3Q7Z3D4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LYSMD3Q7Z3D4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LYSMD3Q7Z3D4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LYSMD3Q7Z3D4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.52■□□□□ 0.88
LYSMD3Q7Z3D4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LYSMD3Q7Z3D4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.52■□□□□ 0.88
LYSMD3Q7Z3D4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LYSMD3Q7Z3D4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
LYSMD3Q7Z3D4 CYP21A1P-202ENST00000354927 1481 ntBASIC20.52■□□□□ 0.88
LYSMD3Q7Z3D4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LYSMD3Q7Z3D4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.52■□□□□ 0.88
LYSMD3Q7Z3D4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.52■□□□□ 0.88
LYSMD3Q7Z3D4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
LYSMD3Q7Z3D4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
LYSMD3Q7Z3D4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
LYSMD3Q7Z3D4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LYSMD3Q7Z3D4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.52■□□□□ 0.88
LYSMD3Q7Z3D4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
LYSMD3Q7Z3D4 AC010980.2-201ENST00000587099 1412 ntBASIC20.52■□□□□ 0.87
LYSMD3Q7Z3D4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LYSMD3Q7Z3D4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LYSMD3Q7Z3D4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LYSMD3Q7Z3D4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LYSMD3Q7Z3D4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
LYSMD3Q7Z3D4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.51■□□□□ 0.87
LYSMD3Q7Z3D4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LYSMD3Q7Z3D4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LYSMD3Q7Z3D4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
LYSMD3Q7Z3D4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.51■□□□□ 0.87
LYSMD3Q7Z3D4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LYSMD3Q7Z3D4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LYSMD3Q7Z3D4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
LYSMD3Q7Z3D4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LYSMD3Q7Z3D4 AL512625.2-201ENST00000417533 625 ntBASIC20.51■□□□□ 0.87
LYSMD3Q7Z3D4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.51■□□□□ 0.87
LYSMD3Q7Z3D4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.51■□□□□ 0.87
LYSMD3Q7Z3D4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.51■□□□□ 0.87
LYSMD3Q7Z3D4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LYSMD3Q7Z3D4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
LYSMD3Q7Z3D4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LYSMD3Q7Z3D4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LYSMD3Q7Z3D4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms