Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CHMP1BQ7LBR1 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.8■□□□□ 0.6
CHMP1BQ7LBR1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP1BQ7LBR1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP1BQ7LBR1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP1BQ7LBR1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CHMP1BQ7LBR1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CHMP1BQ7LBR1 MIR663A-201ENST00000385250 93 ntBASIC18.8■□□□□ 0.6
CHMP1BQ7LBR1 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.8■□□□□ 0.6
CHMP1BQ7LBR1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.8■□□□□ 0.6
CHMP1BQ7LBR1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CHMP1BQ7LBR1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.8■□□□□ 0.6
CHMP1BQ7LBR1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP1BQ7LBR1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP1BQ7LBR1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP1BQ7LBR1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP1BQ7LBR1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP1BQ7LBR1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.8■□□□□ 0.6
CHMP1BQ7LBR1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP1BQ7LBR1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.8■□□□□ 0.6
CHMP1BQ7LBR1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP1BQ7LBR1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.79■□□□□ 0.6
CHMP1BQ7LBR1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CHMP1BQ7LBR1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP1BQ7LBR1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.79■□□□□ 0.6
CHMP1BQ7LBR1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.79■□□□□ 0.6
CHMP1BQ7LBR1 RAP2CP1-201ENST00000605103 478 ntBASIC18.79■□□□□ 0.6
CHMP1BQ7LBR1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP1BQ7LBR1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.79■□□□□ 0.6
CHMP1BQ7LBR1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP1BQ7LBR1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP1BQ7LBR1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP1BQ7LBR1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.78■□□□□ 0.6
CHMP1BQ7LBR1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP1BQ7LBR1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.78■□□□□ 0.6
CHMP1BQ7LBR1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.78■□□□□ 0.6
CHMP1BQ7LBR1 AC245052.3-201ENST00000450182 901 ntBASIC18.78■□□□□ 0.6
CHMP1BQ7LBR1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CHMP1BQ7LBR1 AC008694.1-202ENST00000636953 945 ntBASIC18.78■□□□□ 0.6
CHMP1BQ7LBR1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP1BQ7LBR1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP1BQ7LBR1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP1BQ7LBR1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CHMP1BQ7LBR1 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP1BQ7LBR1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP1BQ7LBR1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.78■□□□□ 0.6
CHMP1BQ7LBR1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP1BQ7LBR1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP1BQ7LBR1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CHMP1BQ7LBR1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP1BQ7LBR1 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP1BQ7LBR1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP1BQ7LBR1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CHMP1BQ7LBR1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP1BQ7LBR1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP1BQ7LBR1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.77■□□□□ 0.6
CHMP1BQ7LBR1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.77■□□□□ 0.6
CHMP1BQ7LBR1 CROCCP5-201ENST00000436658 830 ntBASIC18.77■□□□□ 0.6
CHMP1BQ7LBR1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.77■□□□□ 0.6
CHMP1BQ7LBR1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.77■□□□□ 0.6
CHMP1BQ7LBR1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CHMP1BQ7LBR1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP1BQ7LBR1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.77■□□□□ 0.6
CHMP1BQ7LBR1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CHMP1BQ7LBR1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CHMP1BQ7LBR1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.77■□□□□ 0.6
CHMP1BQ7LBR1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.77■□□□□ 0.6
CHMP1BQ7LBR1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CHMP1BQ7LBR1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHMP1BQ7LBR1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP1BQ7LBR1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP1BQ7LBR1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP1BQ7LBR1 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.76■□□□□ 0.59
CHMP1BQ7LBR1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CHMP1BQ7LBR1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP1BQ7LBR1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP1BQ7LBR1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP1BQ7LBR1 GPX1P1-201ENST00000388829 606 ntBASIC18.76■□□□□ 0.59
CHMP1BQ7LBR1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP1BQ7LBR1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP1BQ7LBR1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.76■□□□□ 0.59
CHMP1BQ7LBR1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.76■□□□□ 0.59
CHMP1BQ7LBR1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CHMP1BQ7LBR1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.76■□□□□ 0.59
CHMP1BQ7LBR1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP1BQ7LBR1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP1BQ7LBR1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.76■□□□□ 0.59
CHMP1BQ7LBR1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.76■□□□□ 0.59
CHMP1BQ7LBR1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP1BQ7LBR1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP1BQ7LBR1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CHMP1BQ7LBR1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.76■□□□□ 0.59
CHMP1BQ7LBR1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP1BQ7LBR1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP1BQ7LBR1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CHMP1BQ7LBR1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP1BQ7LBR1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP1BQ7LBR1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
CHMP1BQ7LBR1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP1BQ7LBR1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms