Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
LINC00575Q6W349 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00575Q6W349 YBX1P4-201ENST00000392794 808 ntBASIC12.96□□□□□ -0.33
LINC00575Q6W349 BX664725.1-201ENST00000438252 379 ntBASIC12.96□□□□□ -0.33
LINC00575Q6W349 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC12.96□□□□□ -0.33
LINC00575Q6W349 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC12.96□□□□□ -0.33
LINC00575Q6W349 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC00575Q6W349 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC00575Q6W349 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC00575Q6W349 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00575Q6W349 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC12.96□□□□□ -0.33
LINC00575Q6W349 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00575Q6W349 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
LINC00575Q6W349 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
LINC00575Q6W349 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00575Q6W349 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
LINC00575Q6W349 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00575Q6W349 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00575Q6W349 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00575Q6W349 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00575Q6W349 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00575Q6W349 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00575Q6W349 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC00575Q6W349 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
LINC00575Q6W349 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LINC00575Q6W349 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00575Q6W349 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00575Q6W349 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LINC00575Q6W349 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00575Q6W349 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00575Q6W349 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC00575Q6W349 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC00575Q6W349 AC103834.1-201ENST00000520383 144 ntBASIC12.95□□□□□ -0.34
LINC00575Q6W349 NTF6A-201ENST00000591175 560 ntBASIC12.95□□□□□ -0.34
LINC00575Q6W349 MTDHP2-201ENST00000601468 714 ntBASIC12.95□□□□□ -0.34
LINC00575Q6W349 AC092028.1-203ENST00000608262 953 ntBASIC12.95□□□□□ -0.34
LINC00575Q6W349 AL117332.1-201ENST00000622628 974 ntBASIC12.95□□□□□ -0.34
LINC00575Q6W349 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00575Q6W349 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LINC00575Q6W349 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
LINC00575Q6W349 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00575Q6W349 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
LINC00575Q6W349 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00575Q6W349 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00575Q6W349 EML3-217ENST00000531557 2509 ntTSL 5 BASIC12.95□□□□□ -0.34
LINC00575Q6W349 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC00575Q6W349 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00575Q6W349 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00575Q6W349 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00575Q6W349 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00575Q6W349 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00575Q6W349 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00575Q6W349 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00575Q6W349 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00575Q6W349 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC00575Q6W349 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00575Q6W349 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00575Q6W349 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC00575Q6W349 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC00575Q6W349 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00575Q6W349 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00575Q6W349 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00575Q6W349 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00575Q6W349 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00575Q6W349 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
LINC00575Q6W349 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00575Q6W349 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LINC00575Q6W349 AC011484.1-201ENST00000377652 1995 ntBASIC12.94□□□□□ -0.34
LINC00575Q6W349 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00575Q6W349 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00575Q6W349 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
LINC00575Q6W349 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
LINC00575Q6W349 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00575Q6W349 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC00575Q6W349 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LINC00575Q6W349 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00575Q6W349 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00575Q6W349 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00575Q6W349 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LINC00575Q6W349 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00575Q6W349 AC005332.7-201ENST00000614046 2005 ntBASIC12.93□□□□□ -0.34
LINC00575Q6W349 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LINC00575Q6W349 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC00575Q6W349 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LINC00575Q6W349 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00575Q6W349 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00575Q6W349 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00575Q6W349 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00575Q6W349 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC00575Q6W349 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC12.93□□□□□ -0.34
LINC00575Q6W349 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
LINC00575Q6W349 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00575Q6W349 AL031848.2-201ENST00000607670 837 ntBASIC12.93□□□□□ -0.34
LINC00575Q6W349 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00575Q6W349 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
LINC00575Q6W349 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC12.93□□□□□ -0.34
LINC00575Q6W349 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00575Q6W349 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00575Q6W349 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC00575Q6W349 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms