Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN4Q6PJG9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 AC245052.3-201ENST00000450182 901 ntBASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 AL162430.1-201ENST00000480705 870 ntBASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 UBE2DNL-204ENST00000602536 740 ntBASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRFN4Q6PJG9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 LINC01006-201ENST00000333319 2292 ntBASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRFN4Q6PJG9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LRFN4Q6PJG9 LINC01521-201ENST00000504184 1943 ntBASIC18.33■□□□□ 0.53
LRFN4Q6PJG9 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRFN4Q6PJG9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRFN4Q6PJG9 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRFN4Q6PJG9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRFN4Q6PJG9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LRFN4Q6PJG9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRFN4Q6PJG9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRFN4Q6PJG9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRFN4Q6PJG9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRFN4Q6PJG9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
LRFN4Q6PJG9 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.33■□□□□ 0.52
LRFN4Q6PJG9 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.33■□□□□ 0.52
LRFN4Q6PJG9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.33■□□□□ 0.52
LRFN4Q6PJG9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.33■□□□□ 0.52
LRFN4Q6PJG9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.33■□□□□ 0.52
LRFN4Q6PJG9 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.33■□□□□ 0.52
LRFN4Q6PJG9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRFN4Q6PJG9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
LRFN4Q6PJG9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
LRFN4Q6PJG9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRFN4Q6PJG9 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRFN4Q6PJG9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRFN4Q6PJG9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
LRFN4Q6PJG9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRFN4Q6PJG9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRFN4Q6PJG9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 AC006128.1-201ENST00000624704 1661 ntBASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN4Q6PJG9 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms