Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CDC42BPAQ5VT25 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CDC42BPAQ5VT25 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CDC42BPAQ5VT25 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC31.3■■■□□ 2.6
CDC42BPAQ5VT25 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC31.3■■■□□ 2.6
CDC42BPAQ5VT25 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC31.3■■■□□ 2.6
CDC42BPAQ5VT25 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CDC42BPAQ5VT25 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CDC42BPAQ5VT25 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC31.3■■■□□ 2.6
CDC42BPAQ5VT25 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CDC42BPAQ5VT25 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CDC42BPAQ5VT25 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CDC42BPAQ5VT25 FAM210CP-201ENST00000445714 574 ntBASIC31.29■■■□□ 2.6
CDC42BPAQ5VT25 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC31.29■■■□□ 2.6
CDC42BPAQ5VT25 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC31.29■■■□□ 2.6
CDC42BPAQ5VT25 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
CDC42BPAQ5VT25 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC31.29■■■□□ 2.6
CDC42BPAQ5VT25 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CDC42BPAQ5VT25 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CDC42BPAQ5VT25 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CDC42BPAQ5VT25 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CDC42BPAQ5VT25 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CDC42BPAQ5VT25 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CDC42BPAQ5VT25 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CDC42BPAQ5VT25 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC31.29■■■□□ 2.6
CDC42BPAQ5VT25 PPOX-219ENST00000544598 813 ntTSL 2 BASIC31.29■■■□□ 2.6
CDC42BPAQ5VT25 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC31.29■■■□□ 2.6
CDC42BPAQ5VT25 MIR4785-201ENST00000585005 73 ntBASIC31.29■■■□□ 2.6
CDC42BPAQ5VT25 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CDC42BPAQ5VT25 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC31.28■■■□□ 2.6
CDC42BPAQ5VT25 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
CDC42BPAQ5VT25 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CDC42BPAQ5VT25 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC31.28■■■□□ 2.6
CDC42BPAQ5VT25 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
CDC42BPAQ5VT25 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CDC42BPAQ5VT25 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC31.28■■■□□ 2.6
CDC42BPAQ5VT25 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC31.28■■■□□ 2.6
CDC42BPAQ5VT25 TSPY15P-201ENST00000457163 923 ntBASIC31.28■■■□□ 2.6
CDC42BPAQ5VT25 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC31.28■■■□□ 2.6
CDC42BPAQ5VT25 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC31.28■■■□□ 2.6
CDC42BPAQ5VT25 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CDC42BPAQ5VT25 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CDC42BPAQ5VT25 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CDC42BPAQ5VT25 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC31.28■■■□□ 2.6
CDC42BPAQ5VT25 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
CDC42BPAQ5VT25 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
CDC42BPAQ5VT25 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC31.27■■■□□ 2.6
CDC42BPAQ5VT25 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CDC42BPAQ5VT25 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC31.27■■■□□ 2.6
CDC42BPAQ5VT25 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CDC42BPAQ5VT25 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC31.27■■■□□ 2.6
CDC42BPAQ5VT25 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
CDC42BPAQ5VT25 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CDC42BPAQ5VT25 THEM4-205ENST00000489410 643 ntTSL 2 BASIC31.27■■■□□ 2.6
CDC42BPAQ5VT25 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC31.27■■■□□ 2.6
CDC42BPAQ5VT25 AC010331.1-201ENST00000611423 582 ntBASIC31.27■■■□□ 2.6
CDC42BPAQ5VT25 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
CDC42BPAQ5VT25 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC31.27■■■□□ 2.6
CDC42BPAQ5VT25 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CDC42BPAQ5VT25 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CDC42BPAQ5VT25 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CDC42BPAQ5VT25 MAX-217ENST00000557277 728 ntTSL 3 BASIC31.27■■■□□ 2.6
CDC42BPAQ5VT25 BRWD1-AS2-201ENST00000603064 1028 ntBASIC31.27■■■□□ 2.6
CDC42BPAQ5VT25 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC31.27■■■□□ 2.6
CDC42BPAQ5VT25 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
CDC42BPAQ5VT25 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CDC42BPAQ5VT25 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CDC42BPAQ5VT25 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CDC42BPAQ5VT25 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC31.26■■■□□ 2.59
CDC42BPAQ5VT25 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC31.26■■■□□ 2.59
CDC42BPAQ5VT25 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC31.26■■■□□ 2.59
CDC42BPAQ5VT25 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
CDC42BPAQ5VT25 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CDC42BPAQ5VT25 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CDC42BPAQ5VT25 TERT-206ENST00000508104 2486 ntTSL 5 BASIC31.26■■■□□ 2.59
CDC42BPAQ5VT25 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
CDC42BPAQ5VT25 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CDC42BPAQ5VT25 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CDC42BPAQ5VT25 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CDC42BPAQ5VT25 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CDC42BPAQ5VT25 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
CDC42BPAQ5VT25 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CDC42BPAQ5VT25 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC31.25■■■□□ 2.59
CDC42BPAQ5VT25 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CDC42BPAQ5VT25 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CDC42BPAQ5VT25 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC31.25■■■□□ 2.59
CDC42BPAQ5VT25 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC31.25■■■□□ 2.59
CDC42BPAQ5VT25 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
CDC42BPAQ5VT25 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CDC42BPAQ5VT25 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CDC42BPAQ5VT25 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CDC42BPAQ5VT25 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
CDC42BPAQ5VT25 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CDC42BPAQ5VT25 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CDC42BPAQ5VT25 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC31.24■■■□□ 2.59
CDC42BPAQ5VT25 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC31.24■■■□□ 2.59
CDC42BPAQ5VT25 AL135905.2-201ENST00000584934 1404 ntBASIC31.24■■■□□ 2.59
CDC42BPAQ5VT25 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC31.24■■■□□ 2.59
CDC42BPAQ5VT25 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC31.24■■■□□ 2.59
CDC42BPAQ5VT25 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms