Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SAPCD2P4-201ENST00000424595 1171 ntBASIC26.05■■□□□ 1.76
RC3H1Q5TC82 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC26.05■■□□□ 1.76
RC3H1Q5TC82 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC26.05■■□□□ 1.76
RC3H1Q5TC82 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
RC3H1Q5TC82 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RC3H1Q5TC82 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RC3H1Q5TC82 C1orf229-201ENST00000623686 2258 ntBASIC26.05■■□□□ 1.76
RC3H1Q5TC82 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RC3H1Q5TC82 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RC3H1Q5TC82 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
RC3H1Q5TC82 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RC3H1Q5TC82 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RC3H1Q5TC82 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
RC3H1Q5TC82 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC26.04■■□□□ 1.76
RC3H1Q5TC82 AC026471.5-201ENST00000615068 467 ntBASIC26.04■■□□□ 1.76
RC3H1Q5TC82 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC26.04■■□□□ 1.76
RC3H1Q5TC82 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RC3H1Q5TC82 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC26.04■■□□□ 1.76
RC3H1Q5TC82 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC26.04■■□□□ 1.76
RC3H1Q5TC82 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RC3H1Q5TC82 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RC3H1Q5TC82 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RC3H1Q5TC82 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RC3H1Q5TC82 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RC3H1Q5TC82 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC26.03■■□□□ 1.76
RC3H1Q5TC82 GRAP-204ENST00000573099 846 ntTSL 3 BASIC26.03■■□□□ 1.76
RC3H1Q5TC82 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
RC3H1Q5TC82 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
RC3H1Q5TC82 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC26.03■■□□□ 1.76
RC3H1Q5TC82 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RC3H1Q5TC82 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
RC3H1Q5TC82 EXOC3-AS1-202ENST00000623673 1663 ntBASIC26.03■■□□□ 1.76
RC3H1Q5TC82 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
RC3H1Q5TC82 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RC3H1Q5TC82 HES2-206ENST00000489730 730 ntTSL 2 BASIC26.02■■□□□ 1.76
RC3H1Q5TC82 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC26.02■■□□□ 1.76
RC3H1Q5TC82 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC26.02■■□□□ 1.76
RC3H1Q5TC82 CD177P1-201ENST00000606252 935 ntBASIC26.02■■□□□ 1.76
RC3H1Q5TC82 AL121829.2-201ENST00000620908 328 ntBASIC26.02■■□□□ 1.76
RC3H1Q5TC82 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RC3H1Q5TC82 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RC3H1Q5TC82 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RC3H1Q5TC82 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RC3H1Q5TC82 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RC3H1Q5TC82 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
RC3H1Q5TC82 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
RC3H1Q5TC82 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RC3H1Q5TC82 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RC3H1Q5TC82 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RC3H1Q5TC82 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RC3H1Q5TC82 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
RC3H1Q5TC82 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC26.01■■□□□ 1.75
RC3H1Q5TC82 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
RC3H1Q5TC82 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
RC3H1Q5TC82 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RC3H1Q5TC82 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RC3H1Q5TC82 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC26.01■■□□□ 1.75
RC3H1Q5TC82 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC26.01■■□□□ 1.75
RC3H1Q5TC82 AP003071.4-201ENST00000562276 1284 ntBASIC26.01■■□□□ 1.75
RC3H1Q5TC82 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC26.01■■□□□ 1.75
RC3H1Q5TC82 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC26■■□□□ 1.75
RC3H1Q5TC82 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
RC3H1Q5TC82 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC26■■□□□ 1.75
RC3H1Q5TC82 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC26■■□□□ 1.75
RC3H1Q5TC82 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
RC3H1Q5TC82 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RC3H1Q5TC82 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
RC3H1Q5TC82 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC26■■□□□ 1.75
RC3H1Q5TC82 AF186192.3-201ENST00000583427 947 ntBASIC26■■□□□ 1.75
RC3H1Q5TC82 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC26■■□□□ 1.75
RC3H1Q5TC82 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RC3H1Q5TC82 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC26■■□□□ 1.75
RC3H1Q5TC82 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC25.99■■□□□ 1.75
RC3H1Q5TC82 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
RC3H1Q5TC82 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RC3H1Q5TC82 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC25.99■■□□□ 1.75
RC3H1Q5TC82 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RC3H1Q5TC82 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RC3H1Q5TC82 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RC3H1Q5TC82 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RC3H1Q5TC82 Six3os1_6.1-201ENST00000620790 196 ntBASIC25.99■■□□□ 1.75
RC3H1Q5TC82 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RC3H1Q5TC82 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
RC3H1Q5TC82 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RC3H1Q5TC82 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RC3H1Q5TC82 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RC3H1Q5TC82 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC25.98■■□□□ 1.75
RC3H1Q5TC82 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RC3H1Q5TC82 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC25.98■■□□□ 1.75
RC3H1Q5TC82 MMP23A-201ENST00000234610 1017 ntBASIC25.98■■□□□ 1.75
RC3H1Q5TC82 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
RC3H1Q5TC82 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RC3H1Q5TC82 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RC3H1Q5TC82 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RC3H1Q5TC82 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
RC3H1Q5TC82 KRT16P5-201ENST00000455284 522 ntBASIC25.98■■□□□ 1.75
RC3H1Q5TC82 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC25.98■■□□□ 1.75
RC3H1Q5TC82 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC25.98■■□□□ 1.75
RC3H1Q5TC82 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC25.98■■□□□ 1.75
RC3H1Q5TC82 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms