Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 YMR075C-AYMR075C-A 366 nt1.22□□□□□ -2.21
HRD1Q08109 SWM2YNR004W 441 nt1.22□□□□□ -2.21
HRD1Q08109 YBR090CYBR090C 369 nt1.22□□□□□ -2.21
HRD1Q08109 UBP11YKR098C 2154 nt1.22□□□□□ -2.21
HRD1Q08109 SFB2YNL049C 2631 nt1.22□□□□□ -2.21
HRD1Q08109 RAD18YCR066W 1464 nt1.22□□□□□ -2.21
HRD1Q08109 GNT1YOR320C 1476 nt1.22□□□□□ -2.21
HRD1Q08109 FRK1YPL141C 2598 nt1.22□□□□□ -2.21
HRD1Q08109 PMD1YER132C 5262 nt1.21□□□□□ -2.22
HRD1Q08109 RPN9YDR427W 1182 nt1.21□□□□□ -2.22
HRD1Q08109 GUK1YDR454C 564 nt1.21□□□□□ -2.22
HRD1Q08109 YEL010WYEL010W 351 nt1.21□□□□□ -2.22
HRD1Q08109 CAJ1YER048C 1176 nt1.21□□□□□ -2.22
HRD1Q08109 GTR2YGR163W 1026 nt1.21□□□□□ -2.22
HRD1Q08109 NOP10YHR072W-A 177 nt1.21□□□□□ -2.22
HRD1Q08109 PFD1YJL179W 330 nt1.21□□□□□ -2.22
HRD1Q08109 ARL3YPL051W 597 nt1.21□□□□□ -2.22
HRD1Q08109 ARL1YBR164C 552 nt1.21□□□□□ -2.22
HRD1Q08109 SNF12YNR023W 1701 nt1.2□□□□□ -2.22
HRD1Q08109 CTF4YPR135W 2784 nt1.2□□□□□ -2.22
HRD1Q08109 YDL062WYDL062W 426 nt1.2□□□□□ -2.22
HRD1Q08109 YDR262WYDR262W 819 nt1.2□□□□□ -2.22
HRD1Q08109 YFR032C-BYFR032C-B 264 nt1.2□□□□□ -2.22
HRD1Q08109 PET20YPL159C 762 nt1.2□□□□□ -2.22
HRD1Q08109 ARP7YPR034W 1434 nt1.2□□□□□ -2.22
HRD1Q08109 RPH1YER169W 2391 nt1.2□□□□□ -2.22
HRD1Q08109 SSF2YDR312W 1362 nt1.2□□□□□ -2.22
HRD1Q08109 YNL034WYNL034W 1839 nt1.19□□□□□ -2.22
HRD1Q08109 MMS22YLR320W 4365 nt1.19□□□□□ -2.22
HRD1Q08109 YDL041WYDL041W 354 nt1.19□□□□□ -2.22
HRD1Q08109 PRP38YGR075C 729 nt1.19□□□□□ -2.22
HRD1Q08109 YIL082WYIL082W 873 nt1.19□□□□□ -2.22
HRD1Q08109 YOL085W-AYOL085W-A 213 nt1.19□□□□□ -2.22
HRD1Q08109 YOL159CYOL159C 516 nt1.19□□□□□ -2.22
HRD1Q08109 YBR012W-AYBR012W-A 1323 nt1.18□□□□□ -2.22
HRD1Q08109 YOR142W-AYOR142W-A 1323 nt1.18□□□□□ -2.22
HRD1Q08109 YPR158W-AYPR158W-A 1323 nt1.18□□□□□ -2.22
HRD1Q08109 RAD9YDR217C 3930 nt1.18□□□□□ -2.22
HRD1Q08109 PLC1YPL268W 2610 nt1.18□□□□□ -2.22
HRD1Q08109 YDR336WYDR336W 945 nt1.18□□□□□ -2.22
HRD1Q08109 MIC19YFR011C 513 nt1.18□□□□□ -2.22
HRD1Q08109 YIL020C-AYIL020C-A 339 nt1.18□□□□□ -2.22
HRD1Q08109 NEJ1YLR265C 1029 nt1.18□□□□□ -2.22
HRD1Q08109 MTG1YMR097C 1104 nt1.18□□□□□ -2.22
HRD1Q08109 YMR173W-AYMR173W-A 1185 nt1.18□□□□□ -2.22
HRD1Q08109 LSM7YNL147W 348 nt1.18□□□□□ -2.22
HRD1Q08109 MEI5YPL121C 669 nt1.18□□□□□ -2.22
HRD1Q08109 CUR1YPR158W 759 nt1.18□□□□□ -2.22
HRD1Q08109 CSH1YBR161W 1131 nt1.18□□□□□ -2.22
HRD1Q08109 YDR338CYDR338C 2088 nt1.18□□□□□ -2.22
HRD1Q08109 YLR419WYLR419W 4308 nt1.18□□□□□ -2.22
HRD1Q08109 AHC1YOR023C 1701 nt1.18□□□□□ -2.22
HRD1Q08109 BST1YFL025C 3090 nt1.17□□□□□ -2.22
HRD1Q08109 CTR9YOL145C 3234 nt1.17□□□□□ -2.22
HRD1Q08109 HIR3YJR140C 4947 nt1.17□□□□□ -2.22
HRD1Q08109 AHC2YCR082W 387 nt1.17□□□□□ -2.22
HRD1Q08109 GPI8YDR331W 1236 nt1.17□□□□□ -2.22
HRD1Q08109 SLD5YDR489W 885 nt1.17□□□□□ -2.22
HRD1Q08109 SMD1YGR074W 441 nt1.17□□□□□ -2.22
HRD1Q08109 SMD2YLR275W 333 nt1.17□□□□□ -2.22
HRD1Q08109 YHC1YLR298C 696 nt1.17□□□□□ -2.22
HRD1Q08109 ATG16YMR159C 453 nt1.17□□□□□ -2.22
HRD1Q08109 YOL159C-AYOL159C-A 273 nt1.17□□□□□ -2.22
HRD1Q08109 IRC13YOR235W 315 nt1.17□□□□□ -2.22
HRD1Q08109 SHG1YBR258C 429 nt1.17□□□□□ -2.22
HRD1Q08109 MSH3YCR092C 3057 nt1.17□□□□□ -2.22
HRD1Q08109 NUP120YKL057C 3114 nt1.17□□□□□ -2.22
HRD1Q08109 CRM1YGR218W 3255 nt1.16□□□□□ -2.22
HRD1Q08109 LAA1YJL207C 6045 nt1.16□□□□□ -2.22
HRD1Q08109 RPI1YIL119C 1224 nt1.16□□□□□ -2.22
HRD1Q08109 ALB1YJL122W 528 nt1.16□□□□□ -2.22
HRD1Q08109 YBR051WYBR051W 351 nt1.16□□□□□ -2.22
HRD1Q08109 RPB5YBR154C 648 nt1.16□□□□□ -2.22
HRD1Q08109 PHR1YOR386W 1698 nt1.16□□□□□ -2.22
HRD1Q08109 SPC72YAL047C 1869 nt1.16□□□□□ -2.22
HRD1Q08109 BFA1YJR053W 1725 nt1.15□□□□□ -2.22
HRD1Q08109 SEY1YOR165W 2331 nt1.15□□□□□ -2.23
HRD1Q08109 RPL40AYIL148W 387 nt1.15□□□□□ -2.23
HRD1Q08109 BUD19YJL188C 309 nt1.15□□□□□ -2.23
HRD1Q08109 COX8YLR395C 237 nt1.15□□□□□ -2.23
HRD1Q08109 PDP3YLR455W 915 nt1.15□□□□□ -2.23
HRD1Q08109 YOL162WYOL162W 648 nt1.15□□□□□ -2.23
HRD1Q08109 CDC31YOR257W 486 nt1.15□□□□□ -2.23
HRD1Q08109 NSL1YPL233W 651 nt1.15□□□□□ -2.23
HRD1Q08109 RRP15YPR143W 753 nt1.15□□□□□ -2.23
HRD1Q08109 TRS20YBR254C 528 nt1.15□□□□□ -2.23
HRD1Q08109 PEX34YCL056C 435 nt1.15□□□□□ -2.23
HRD1Q08109 RSM22YKL155C 1887 nt1.15□□□□□ -2.23
HRD1Q08109 COX1Q0045 1605 nt1.15□□□□□ -2.23
HRD1Q08109 YDL157CYDL157C 357 nt1.14□□□□□ -2.23
HRD1Q08109 YDR042CYDR042C 603 nt1.14□□□□□ -2.23
HRD1Q08109 FAR7YFR008W 666 nt1.14□□□□□ -2.23
HRD1Q08109 YHR214W-AYHR214W-A 486 nt1.14□□□□□ -2.23
HRD1Q08109 YJL015CYJL015C 285 nt1.14□□□□□ -2.23
HRD1Q08109 PSF2YJL072C 642 nt1.14□□□□□ -2.23
HRD1Q08109 MCM22YJR135C 720 nt1.14□□□□□ -2.23
HRD1Q08109 YAR068WYAR068W 486 nt1.14□□□□□ -2.23
HRD1Q08109 TRM732YMR259C 4263 nt1.13□□□□□ -2.23
HRD1Q08109 MDM20YOL076W 2391 nt1.13□□□□□ -2.23
HRD1Q08109 NCS2YNL119W 1482 nt1.13□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 19 ms