Protein–RNA interactions for Protein: Q06236

SHH4, Mitochondrial inner membrane protein SHH4, yeastyeast

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHH4Q06236 AIM18YHR198C 966 nt1.25□□□□□ -2.21
SHH4Q06236 BUD19YJL188C 309 nt1.25□□□□□ -2.21
SHH4Q06236 PEX27YOR193W 1131 nt1.25□□□□□ -2.21
SHH4Q06236 SLM1YIL105C 2061 nt1.25□□□□□ -2.21
SHH4Q06236 VPS41YDR080W 2979 nt1.25□□□□□ -2.21
SHH4Q06236 HIR3YJR140C 4947 nt1.25□□□□□ -2.21
SHH4Q06236 JIP5YPR169W 1479 nt1.24□□□□□ -2.21
SHH4Q06236 DNF3YMR162C 4971 nt1.24□□□□□ -2.21
SHH4Q06236 MMS22YLR320W 4365 nt1.24□□□□□ -2.21
SHH4Q06236 SAC3YDR159W 3906 nt1.24□□□□□ -2.21
SHH4Q06236 YCR013CYCR013C 648 nt1.24□□□□□ -2.21
SHH4Q06236 RPL40AYIL148W 387 nt1.24□□□□□ -2.21
SHH4Q06236 PAU14YIL176C 363 nt1.24□□□□□ -2.21
SHH4Q06236 PAU1YJL223C 363 nt1.24□□□□□ -2.21
SHH4Q06236 YJR023CYJR023C 402 nt1.24□□□□□ -2.21
SHH4Q06236 YET1YKL065C 621 nt1.24□□□□□ -2.21
SHH4Q06236 YLR458WYLR458W 381 nt1.24□□□□□ -2.21
SHH4Q06236 TAP42YMR028W 1101 nt1.24□□□□□ -2.21
SHH4Q06236 YNR068CYNR068C 819 nt1.24□□□□□ -2.21
SHH4Q06236 UFE1YOR075W 1041 nt1.24□□□□□ -2.21
SHH4Q06236 YOR394C-AYOR394C-A 168 nt1.24□□□□□ -2.21
SHH4Q06236 VMR1YHL035C 4779 nt1.24□□□□□ -2.21
SHH4Q06236 MDM20YOL076W 2391 nt1.23□□□□□ -2.21
SHH4Q06236 SHS1YDL225W 1656 nt1.23□□□□□ -2.21
SHH4Q06236 VTC3YPL019C 2508 nt1.23□□□□□ -2.21
SHH4Q06236 ASM4YDL088C 1587 nt1.23□□□□□ -2.21
SHH4Q06236 SLU7YDR088C 1149 nt1.23□□□□□ -2.21
SHH4Q06236 TPK3YKL166C 1197 nt1.23□□□□□ -2.21
SHH4Q06236 SFG1YOR315W 1041 nt1.23□□□□□ -2.21
SHH4Q06236 TYE7YOR344C 876 nt1.23□□□□□ -2.21
SHH4Q06236 MGR1YCL044C 1254 nt1.23□□□□□ -2.21
SHH4Q06236 HKR1YDR420W 5409 nt1.23□□□□□ -2.21
SHH4Q06236 CHS1YNL192W 3396 nt1.23□□□□□ -2.21
SHH4Q06236 HMI1YOL095C 2121 nt1.22□□□□□ -2.21
SHH4Q06236 CTF4YPR135W 2784 nt1.22□□□□□ -2.21
SHH4Q06236 YIP1YGR172C 747 nt1.22□□□□□ -2.21
SHH4Q06236 YGR242WYGR242W 309 nt1.22□□□□□ -2.21
SHH4Q06236 YHR214W-AYHR214W-A 486 nt1.22□□□□□ -2.21
SHH4Q06236 PSY1YKL076C 384 nt1.22□□□□□ -2.21
SHH4Q06236 YLR140WYLR140W 327 nt1.22□□□□□ -2.21
SHH4Q06236 YAR068WYAR068W 486 nt1.22□□□□□ -2.21
SHH4Q06236 NGG1YDR176W 2109 nt1.22□□□□□ -2.21
SHH4Q06236 BPH1YCR032W 6504 nt1.22□□□□□ -2.21
SHH4Q06236 NOP53YPL146C 1368 nt1.21□□□□□ -2.21
SHH4Q06236 FIG2YCR089W 4830 nt1.21□□□□□ -2.22
SHH4Q06236 BST1YFL025C 3090 nt1.21□□□□□ -2.22
SHH4Q06236 APM3YBR288C 1452 nt1.21□□□□□ -2.22
SHH4Q06236 tC(GCA)BtC(GCA)B 72 nt1.21□□□□□ -2.22
SHH4Q06236 tC(GCA)GtC(GCA)G 72 nt1.21□□□□□ -2.22
SHH4Q06236 tC(GCA)P1tC(GCA)P1 72 nt1.21□□□□□ -2.22
SHH4Q06236 tC(GCA)P2tC(GCA)P2 72 nt1.21□□□□□ -2.22
SHH4Q06236 ATC1YDR184C 885 nt1.21□□□□□ -2.22
SHH4Q06236 HSK3YKL138C-A 210 nt1.21□□□□□ -2.22
SHH4Q06236 YML090WYML090W 387 nt1.21□□□□□ -2.22
SHH4Q06236 CMC2YBL059C-A 330 nt1.21□□□□□ -2.22
SHH4Q06236 HSL1YKL101W 4557 nt1.21□□□□□ -2.22
SHH4Q06236 YBP1YBR216C 2025 nt1.21□□□□□ -2.22
SHH4Q06236 COX1Q0045 1605 nt1.2□□□□□ -2.22
SHH4Q06236 TSA2YDR453C 591 nt1.2□□□□□ -2.22
SHH4Q06236 YER068C-AYER068C-A 432 nt1.2□□□□□ -2.22
SHH4Q06236 BTN2YGR142W 1233 nt1.2□□□□□ -2.22
SHH4Q06236 MCM22YJR135C 720 nt1.2□□□□□ -2.22
SHH4Q06236 RPS22BYLR367W 393 nt1.2□□□□□ -2.22
SHH4Q06236 DIA1YMR316W 1011 nt1.2□□□□□ -2.22
SHH4Q06236 NDD1YOR372C 1665 nt1.2□□□□□ -2.22
SHH4Q06236 RUB1YDR139C 234 nt1.19□□□□□ -2.22
SHH4Q06236 YGL218WYGL218W 651 nt1.19□□□□□ -2.22
SHH4Q06236 GRX8YLR364W 330 nt1.19□□□□□ -2.22
SHH4Q06236 YMR158C-AYMR158C-A 138 nt1.19□□□□□ -2.22
SHH4Q06236 YSW1YBR148W 1830 nt1.19□□□□□ -2.22
SHH4Q06236 CCH1YGR217W 6120 nt1.18□□□□□ -2.22
SHH4Q06236 YJL127C-BYJL127C-B 159 nt1.18□□□□□ -2.22
SHH4Q06236 ATP18YML081C-A 180 nt1.18□□□□□ -2.22
SHH4Q06236 RPS16AYMR143W 432 nt1.18□□□□□ -2.22
SHH4Q06236 URK1YNR012W 1506 nt1.18□□□□□ -2.22
SHH4Q06236 GYP5YPL249C 2685 nt1.18□□□□□ -2.22
SHH4Q06236 FRK1YPL141C 2598 nt1.17□□□□□ -2.22
SHH4Q06236 SEC21YNL287W 2808 nt1.17□□□□□ -2.22
SHH4Q06236 SSK2YNR031C 4740 nt1.17□□□□□ -2.22
SHH4Q06236 VTC1YER072W 390 nt1.17□□□□□ -2.22
SHH4Q06236 THG1YGR024C 714 nt1.17□□□□□ -2.22
SHH4Q06236 SVP26YHR181W 687 nt1.17□□□□□ -2.22
SHH4Q06236 IST3YIR005W 447 nt1.17□□□□□ -2.22
SHH4Q06236 YAP5YIR018W 738 nt1.17□□□□□ -2.22
SHH4Q06236 SIP18YMR175W 240 nt1.17□□□□□ -2.22
SHH4Q06236 YOL019W-AYOL019W-A 153 nt1.17□□□□□ -2.22
SHH4Q06236 SPT14YPL175W 1359 nt1.17□□□□□ -2.22
SHH4Q06236 ZRG8YER033C 3231 nt1.16□□□□□ -2.22
SHH4Q06236 DAS1YJL149W 1992 nt1.16□□□□□ -2.22
SHH4Q06236 YGL069CYGL069C 465 nt1.16□□□□□ -2.22
SHH4Q06236 YOR169CYOR169C 465 nt1.16□□□□□ -2.22
SHH4Q06236 YDR210W-AYDR210W-A 1317 nt1.15□□□□□ -2.22
SHH4Q06236 YOR343W-AYOR343W-A 1317 nt1.15□□□□□ -2.22
SHH4Q06236 FYV8YGR196C 2454 nt1.15□□□□□ -2.22
SHH4Q06236 PET127YOR017W 2403 nt1.15□□□□□ -2.23
SHH4Q06236 YDL009CYDL009C 324 nt1.15□□□□□ -2.23
SHH4Q06236 GIC1YHR061C 945 nt1.15□□□□□ -2.23
SHH4Q06236 PAI3YMR174C 207 nt1.15□□□□□ -2.23
SHH4Q06236 IPI3YNL182C 1668 nt1.15□□□□□ -2.23
SHH4Q06236 CDC27YBL084C 2277 nt1.15□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 131.8 ms