Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 FP700111.2-201ENST00000619190 1892 ntBASIC17.23■□□□□ 0.35
COL10A1Q03692 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL10A1Q03692 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.23■□□□□ 0.35
COL10A1Q03692 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.23■□□□□ 0.35
COL10A1Q03692 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL10A1Q03692 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.23■□□□□ 0.35
COL10A1Q03692 AC010536.3-201ENST00000620306 533 ntBASIC17.23■□□□□ 0.35
COL10A1Q03692 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
COL10A1Q03692 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL10A1Q03692 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL10A1Q03692 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL10A1Q03692 AC007225.1-201ENST00000566331 1836 ntBASIC17.23■□□□□ 0.35
COL10A1Q03692 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL10A1Q03692 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL10A1Q03692 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
COL10A1Q03692 AL157384.1-201ENST00000445995 2473 ntBASIC17.23■□□□□ 0.35
COL10A1Q03692 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL10A1Q03692 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL10A1Q03692 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
COL10A1Q03692 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.22■□□□□ 0.35
COL10A1Q03692 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL10A1Q03692 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
COL10A1Q03692 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL10A1Q03692 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.22■□□□□ 0.35
COL10A1Q03692 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL10A1Q03692 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COL10A1Q03692 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
COL10A1Q03692 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.22■□□□□ 0.35
COL10A1Q03692 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.22■□□□□ 0.35
COL10A1Q03692 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL10A1Q03692 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL10A1Q03692 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.22■□□□□ 0.35
COL10A1Q03692 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL10A1Q03692 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL10A1Q03692 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
COL10A1Q03692 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COL10A1Q03692 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL10A1Q03692 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.22■□□□□ 0.35
COL10A1Q03692 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
COL10A1Q03692 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL10A1Q03692 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL10A1Q03692 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.21■□□□□ 0.35
COL10A1Q03692 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.21■□□□□ 0.35
COL10A1Q03692 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL10A1Q03692 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL10A1Q03692 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL10A1Q03692 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
COL10A1Q03692 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.21■□□□□ 0.35
COL10A1Q03692 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL10A1Q03692 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.21■□□□□ 0.35
COL10A1Q03692 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
COL10A1Q03692 AC007322.3-201ENST00000426526 701 ntBASIC17.21■□□□□ 0.35
COL10A1Q03692 TERF1P5-201ENST00000477545 1207 ntBASIC17.21■□□□□ 0.35
COL10A1Q03692 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.21■□□□□ 0.35
COL10A1Q03692 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
COL10A1Q03692 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.21■□□□□ 0.35
COL10A1Q03692 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.21■□□□□ 0.35
COL10A1Q03692 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.21■□□□□ 0.35
COL10A1Q03692 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL10A1Q03692 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.21■□□□□ 0.35
COL10A1Q03692 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
COL10A1Q03692 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.34
COL10A1Q03692 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
COL10A1Q03692 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
COL10A1Q03692 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
COL10A1Q03692 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
COL10A1Q03692 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL10A1Q03692 FEM1AP1-201ENST00000431297 1995 ntBASIC17.2■□□□□ 0.34
COL10A1Q03692 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.2■□□□□ 0.34
COL10A1Q03692 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
COL10A1Q03692 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL10A1Q03692 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL10A1Q03692 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL10A1Q03692 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
COL10A1Q03692 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL10A1Q03692 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.2■□□□□ 0.34
COL10A1Q03692 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL10A1Q03692 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL10A1Q03692 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL10A1Q03692 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
COL10A1Q03692 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL10A1Q03692 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL10A1Q03692 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.2■□□□□ 0.34
COL10A1Q03692 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.2■□□□□ 0.34
COL10A1Q03692 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
COL10A1Q03692 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL10A1Q03692 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.2■□□□□ 0.34
COL10A1Q03692 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL10A1Q03692 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
COL10A1Q03692 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL10A1Q03692 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
COL10A1Q03692 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL10A1Q03692 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
COL10A1Q03692 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL10A1Q03692 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
COL10A1Q03692 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL10A1Q03692 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL10A1Q03692 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
COL10A1Q03692 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL10A1Q03692 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms